Burkholderia ambifaria MC40-6: BamMC406_5007
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Entry
BamMC406_5007 CDS
T00684
Name
(GenBank) porin Gram-negative type
KO
K08720
outer membrane protein OmpU
Organism
bac
Burkholderia ambifaria MC40-6
Pathway
bac01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
bac00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
BamMC406_5007
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
bac02000
]
BamMC406_5007
Transporters [BR:
bac02000
]
Other transporters
Pores ion channels [TC:
1
]
BamMC406_5007
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Porin_4
Porin_1
Motif
Other DBs
NCBI-ProteinID:
ACB67453
UniProt:
B1YZQ3
LinkDB
All DBs
Position
2:complement(2163944..2165083)
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AA seq
379 aa
AA seq
DB search
MKQKKVAVAAALACAACIPAIGHAQSSVTLYGILDAGITYVNNTGGSHVVKFDDGVAYGN
RFGLKGTEDLGGGLKAVFVLESGFHLGNGQLGFGGSEFGRQAYVGLQNDWGTLSFGNQLD
ITNELVSIYNISAWGSGYAIHQGDFDRFNGDRLPNSVKFLSNDLSGFKFGAMYSFGNVAG
NFHRNSAWSAGASYTKGDFSIGAAYTRLNNPNGIYAFDPYAMIGTHTFLGQQTVTVDPAT
GARTDLFANTAMDVDSQGTFGVGTSYTIGKLTLDANYSYTTIKGFGQSSHMQVYEGGGLY
QFTPALSFIAGYQHTRFEGHHWNQGTAGLHYLLSKRTDVYISGDYLRASHGVDAVVGYSF
TPSTTQTQADVRIGMRHSF
NT seq
1140 nt
NT seq
+upstream
nt +downstream
nt
atgaagcaaaagaaagttgccgtagccgctgcgcttgcatgcgcggcctgtattcccgcc
atcggccatgcacagagcagcgtgacgctgtacgggattctcgacgcgggcatcacctac
gtgaacaacacgggcggctcgcacgtggtcaagttcgacgacggcgtcgcatacgggaac
cgtttcggcctgaaaggcacggaagatctcggcggcggcctgaaggccgtgttcgtgctc
gagagcggtttccacctcggcaacgggcagctcggcttcggcgggtcggagttcggtcgg
caggcttatgtcggtctgcagaacgactggggcacgctgtcgttcggcaaccagctcgac
atcaccaacgaactggtgtcgatctacaacatttccgcgtggggcagcggctatgcgatc
caccagggcgacttcgaccgcttcaacggcgaccgcctgccgaactcggtcaaattcctg
tcgaacgacctgagcggcttcaagttcggcgcgatgtactcgttcggcaacgtcgccggc
aacttccaccgcaacagcgcatggagcgcgggcgcgagctacacgaagggcgacttctcg
atcggcgccgcgtacacgcgcctgaacaacccgaacggcatctacgcgttcgacccgtac
gcgatgatcggcacgcatacgttcctcggccagcagaccgtcaccgtcgatccggcgacc
ggcgcgcgcaccgacctgttcgcgaataccgcgatggacgtcgacagccagggcacgttc
ggcgtcggcacgagctacacgatcggcaagctgacgctcgacgcgaactactcgtacacg
acgatcaagggcttcggccagtcgtcgcacatgcaggtgtacgaaggcggcggcctgtat
cagttcacgccggcgcttagcttcatcgcgggctaccagcacacgcgcttcgaaggccac
cactggaaccagggcacggccggcctccactacctgctgtcgaagcgcaccgacgtgtac
atctccggcgattacctgcgcgcgtcgcacggtgtcgatgcggtggtcggctacagcttc
acgccgtcgaccacgcagacgcaggccgacgtgcggatcggcatgcggcattctttctga
DBGET
integrated database retrieval system
