Bacteroidales bacterium CF: BRDCF_p2088
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Entry
BRDCF_p2088 CDS
T02861
Symbol
phr
Name
(GenBank) Deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
bacc
Bacteroidales bacterium CF
Brite
KEGG Orthology (KO) [BR:
bacc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bacc03400
]
BRDCF_p2088 (phr)
Enzymes [BR:
bacc01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
BRDCF_p2088 (phr)
DNA repair and recombination proteins [BR:
bacc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
BRDCF_p2088 (phr)
Prokaryotic type
BRDCF_p2088 (phr)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Sigma_M_inh
Motif
Other DBs
NCBI-ProteinID:
AGY54715
UniProt:
U5QBA0
LinkDB
All DBs
Position
complement(2402422..2403738)
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AA seq
438 aa
AA seq
DB search
MEQKTDISLFWFRRDLRIDDNCGLYNALIGGQKVLPVFIFDTGILGKLTEQSDKRVAFIY
NSVSDLKREFEKHGSTLLVLYGSPLDIFRLLLEKYNIVSVYANQDYEPYSINRDKSVEEL
LKVRGVEFRTFKDQVIFEKSEVVKSDGSPYTVFTPYSRAWKTALQKSPLPEFPSEHFLGS
LFKTEKSHLPDINEIGFYECDTMAVNPLIREDIITNYQLTRDLPAVEGTSNLGIYLRFGR
LSIRKIVSVALRLNDSWLNELIWREFFMMIISNFPYVVDTSFKKKYDLIRWRNDEEEFFK
WCNGMTGYPMVDAGMRQLNQTGLMHNRVRMVAASFLTKHLLIDWRAGETYFASKLLDYEL
SSNNGNWQWAAGSGCDAAPYFRIFNPYEQQRRYDPDMVYVKRWIPEYDTPDYPSPIVDHT
FARERALKTYREILIMNN
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
atggaacaaaaaacggacatttcgctgttctggttccgcagggatctgaggattgatgat
aactgcgggctttataatgcccttattggcggacaaaaagtgctgcctgtatttatattt
gatacaggaatacttggtaagctcactgagcaaagtgacaaaagagtagcatttatctac
aactccgtttcggatctcaaaagagaattcgagaagcacggcagcacactcctggtcttg
tacggaagcccgctagatattttcagattgcttctggaaaagtataatatagtctctgta
tacgccaatcaagactacgagccctattctatcaatcgtgacaaatctgtcgaggaactc
ttgaaagtaagaggagtggaattcagaacattcaaggatcaggtgatttttgaaaaatcc
gaggtcgttaagagtgacgggagtccttacaccgtcttcacaccatactcccgggcatgg
aaaacagctttgcaaaaaagccctttacccgaatttccgagtgagcattttctgggctct
ctctttaagacagagaaaagccatcttcctgatattaatgaaatcgggttttatgagtgt
gatacaatggctgtcaacccattgatcagagaggatataatcaccaactaccaattgaca
agagatctgcccgctgttgaaggaacctctaatctgggaatatatttgcggttcggaaga
ttgagcatccgcaagattgtatcggttgcattgaggttaaatgactcctggttaaacgag
ttaatctggcgagagtttttcatgatgattatctctaattttccatatgtggttgacaca
agcttcaagaaaaaatatgacctgatacgctggcgcaatgatgaagaggagttctttaaa
tggtgcaacggaatgaccggttacccgatggtggatgccggtatgcgacagcttaaccaa
accggtctgatgcataacagggtaaggatggttgccgcaagtttcctgacaaagcacctg
ttaattgactggagggccggagagacctattttgcctccaagcttctggattacgagctc
tcttcaaataatgggaattggcagtgggcagcagggtcgggatgtgatgccgcgccatat
ttcaggattttcaacccttatgagcagcaacgacgttatgacccggacatggtctatgtg
aagaggtggattcccgaatacgatacccctgattacccttcgccaattgtagatcacact
tttgcaagagagagagctttgaagacatatcgtgaaatattgatcatgaataactag
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