Bacterioplanoides sp. SCSIO 12839: KFF03_05955
Help
Entry
KFF03_05955 CDS
T08310
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
bacz
Bacterioplanoides sp. SCSIO 12839
Brite
KEGG Orthology (KO) [BR:
bacz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bacz03032
]
KFF03_05955 (topA)
03400 DNA repair and recombination proteins [BR:
bacz03400
]
KFF03_05955 (topA)
Enzymes [BR:
bacz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
KFF03_05955 (topA)
DNA replication proteins [BR:
bacz03032
]
Prokaryotic type
DNA Topoisomerases
KFF03_05955 (topA)
DNA repair and recombination proteins [BR:
bacz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
KFF03_05955 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Topo_Zn_Ribbon
TOP1_ZnF
Toprim
zf-C4_Topoisom
Zn_ribbon_recom
Toprim_2
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
UTW49442
UniProt:
A0A9J7AKS9
LinkDB
All DBs
Position
complement(1282784..1285471)
Genome browser
AA seq
895 aa
AA seq
DB search
MGKSLVIVESPAKAKTINKYLGKDYVVKSSVGHVRDLPTSGSGKTTDPKERAKQAALTRK
MSPEEKAAHKKRKAKEQLIGRMGVNPEDNWKANYQVLPGKEKVVDELKRLAKDADHIYLA
TDLDREGEAIAWHLREIIGEKDKNYRRVVFNEITKKAIQAAFEQPSELNMNRVNAQQARR
FLDRVVGFMVSPLLWAKVARGLSAGRVQSVAVRLIVEREREIRAFIPEEYWEAFAELNTS
DGTELKTQVLKFKGEEFRPTNEADTMAALDTLRASDFIVKSREDKPTSSKPAAPFITSTL
QQAASTRLGFSVKKTMTLAQRLYEAGYITYMRTDSTNLSQDAIDSVRGYITDKLGEAYLP
EQPRLYSSKEGAQEAHEAIRPSDVKLRSGDLKSMEPDAERLYDLIWRRFVACQTNDAKFT
STTITVSAADYDLKTRGRVIRFDGHLKVLPPVSKNDDDKVLPDVQQGEKLNLQELLPKQH
FTKPSPRFSEAALVKELEKRGIGRPSTYASIISTIQDRGYVSLQGRRFYAEKMGDIVTSR
LTESFDELMDYSFTANMEEKLDDIADGEINWTQVLDNFYNDFQNQLDVAGSDEGMRPNAP
VDTDIECPKCSRNMQIRTGSTGVFLGCSGYSLPPKERCTQTLNLIPGDEAITADEDEEAE
SRRLMDKRRCKICDAAMDSYLLDETRKVHICGNNPDCSGFEVEQGQFKIKGYDGPTLECD
RCGSEMQLKSGRFGKYFGCTNEECKNTRKLLKSGEAAPPKMDPIPMPELACQKVEDTYVL
RDGAAGLFLAASQFPKNRETRAPQVAELLSHQAELPQKYHYLLDAPRADGDGNPSVIRYS
RKTKEQYVMTENAEGKATGWTAHFVDSAWVITEKKKAAPKKKTAAKKPAAKKAKS
NT seq
2688 nt
NT seq
+upstream
nt +downstream
nt
atgggtaaatcgctggttatcgtggaatcgcctgccaaggctaaaaccatcaacaaatat
ctgggcaaggactatgttgttaagtccagtgttggtcatgtgcgcgatctccctacatcc
ggttcagggaaaaccaccgacccgaaagagcgcgccaaacaagccgcactgacccgcaag
atgtcaccggaagaaaaagccgcccacaaaaaacgtaaggccaaagaacaattgattggt
cgtatgggcgttaacccggaagacaactggaaagccaactatcaggtgctgcccggtaaa
gaaaaggtcgttgatgaattaaaacggctggccaaagacgctgaccatatctatctcgca
accgatttggaccgcgagggagaagccatcgcctggcaccttcgtgagattatcggcgaa
aaagacaaaaattaccgtcgcgtggtgtttaacgagatcaccaaaaaagccattcaggcg
gcgtttgaacagccatcagagctgaacatgaaccgcgtaaacgcccagcaagcacgtcgt
ttcctcgatcgtgttgttggttttatggtgtcgccattattgtgggcaaaagtcgctcgt
ggtttatccgccggacgagttcaatccgttgcggtacgcctgattgttgagcgcgagcgt
gaaattcgtgcctttattccagaagaatactgggaagcctttgctgagctgaacacctcc
gatggcaccgaattaaaaacccaggtgctgaagtttaaaggtgaggaattccgccctacc
aacgaagctgacaccatggccgcgctggataccctgcgtgccagtgactttattgttaaa
agccgtgaagacaaaccgaccagctccaaacctgctgccccctttattacctcaacactg
caacaagcggccagtacccgtttaggcttcagtgttaagaaaaccatgacgctggcgcaa
cgtttgtacgaagctggttacatcacttacatgcgtaccgactccaccaatctgagtcag
gatgccatcgatagcgtgcgtggttatatcaccgataaactgggtgaagcgtatttaccg
gaacaaccacgcctgtacagcagcaaagaaggcgctcaggaggcgcacgaagcgattcgt
ccttccgatgtaaaactgcgctctggtgatttaaaaagcatggagccggacgctgaacgc
ttatacgacttaatctggcgtcgttttgtcgcctgccagacaaacgatgccaagttcacc
agcaccaccattacggtttctgcggctgactacgatttaaaaacccgtggccgtgtgatt
cgctttgatggccacttaaaggtcttaccgccagtcagcaaaaacgatgacgacaaggtg
ctgccggatgtgcagcagggtgagaagttgaacctgcaagagttgctgcccaaacaacac
tttactaagccttctccgcgcttctctgaagcggcattggtaaaagagttggaaaaacgt
ggcattggccgtccttcaacctacgcctccattatttccaccattcaggatcgtggttac
gtcagcctgcaaggccgtcgcttctacgccgagaaaatgggcgatattgttaccagtcgc
ctgacggaaagctttgatgagctgatggattacagcttcaccgccaatatggaagaaaag
ctggatgatattgccgatggcgaaatcaactggacccaagtgctggataacttctacaac
gacttccaaaaccagctggatgtggcaggtagcgatgaaggcatgcgcccgaatgcgccg
gtggataccgacatcgaatgccctaaatgttctcgcaacatgcagatccgaaccggttca
accggggtatttttaggctgctccggctacagtctgccaccgaaagaacgctgtactcag
actctaaatctgattccaggtgatgaagccatcaccgccgatgaagatgaagaagcggaa
agccgccgcctgatggacaaacgccgctgcaaaatttgtgatgcagcgatggacagctat
ttattagacgaaacccgcaaagtgcatatttgtggtaataacccagactgttcaggcttc
gaagtagaacaaggtcagttcaagatcaaaggttacgacggcccaacactggaatgtgat
cgctgcggcagtgaaatgcagttgaaatccggccgctttggtaaatattttggctgcacc
aacgaagagtgcaaaaacacccgtaagctactgaaaagtggtgaagctgcgccaccaaaa
atggatccgattccgatgccggagttggcttgccagaaagtggaagatacctacgtgtta
cgtgatggtgctgcgggcttattcttagccgccagccaattcccgaaaaaccgcgaaacc
cgtgccccacaagtggcagagttgttatcacatcaggccgagctaccgcagaagtatcat
taccttctggatgctccccgcgctgatggcgacggtaacccgagtgtgattcgttacagt
cgcaagaccaaagaacagtacgtcatgacggaaaatgccgaaggtaaagccactggctgg
actgcgcattttgtcgatagcgcctgggttatcaccgagaagaaaaaagccgctccaaaa
aagaaaacggcagcgaaaaagccagccgctaaaaaggcaaaaagctga
DBGET
integrated database retrieval system
