Bifidobacterium adolescentis ATCC 15703: BAD_1296
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Entry
BAD_1296 CDS
T00437
Name
(GenBank) hypothetical protein
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
bad
Bifidobacterium adolescentis ATCC 15703
Pathway
bad03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bad00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BAD_1296
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bad03019
]
BAD_1296
Messenger RNA biogenesis [BR:
bad03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
BAD_1296
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_J_C
Lactamase_B
Lactamase_B_2
RMMBL
Cuticle_1
Motif
Other DBs
NCBI-ProteinID:
BAF40077
UniProt:
A1A2Z4
LinkDB
All DBs
Position
complement(1623971..1625950)
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AA seq
659 aa
AA seq
DB search
MATEETTKTTTHKRGSKAAKRTETAVKASKTTKAAKSEKTATKKAKSSTRSRGNGGSRNG
GSRGFRGGNGSNRRPSHSAPQSTAPQQDEVLIAPPKYRKGSMRIVPLGGLGEIGRNMNVV
EYNGHILLIDCGVLFPEEEQPGVDLILPDFHYIKDRLDKVEALVLTHGHEDHIGGVPYLL
KLRPDIPLIGSKLTLAFVEAKCKEHRINPTLVEVKGRDKLKVGPFNLEFVNVTHSIPDAL
AVFVQTPAGSLIDTGDIKLDQLPLDHRITDLVEFGKLGEKGVDLLMMDSTNAEVPGFVKP
ETSIGPALDQAFAQATRKIIVASFSSHVHRVQQVVDAAHKYGRKVVFVGRSMVRNMSIAA
DLGYLRLPEDTVIDLKQAHDVQDDKLVYMCTGSQGEPMAALGRIADGNHRDITINEFDTV
ILASSLIPGNEHGVYKVINKLVQLGARVVNRDNAAVHVSGHCNEGELLYMYNIVKPKCAM
PIHGENRHLVANGMIAVKTGVDPQNVVLAEDGDVVDLYHGQAAVVGSVPCGYVYVDGDSV
GELTDEELEKRRILGTEGFVSSFVVVDTETADVITGPKIYLNAVAEDESEFDKVRHQIVE
QLQDAMMQGTRDTYKLQQIMRRTLGGWVARQLHRKPMIVPVVADIAQDVDDAMGLNAAK
NT seq
1980 nt
NT seq
+upstream
nt +downstream
nt
atggctacagaagaaaccacaaagacaacaacacacaagcgcggcagcaaggctgccaag
cgcactgaaaccgcagtcaaggcatccaagaccaccaaggccgcgaagtccgagaagacc
gccaccaagaaggccaagtcctccacccgcagccgtggcaacggtggctcgcgcaacggc
ggctcccgtggattccgtggcggcaacggttcgaaccgtcgcccgtcgcattccgcgccg
caatccaccgcgccgcagcaggacgaggtgctgatcgccccgccgaagtaccgcaagggc
tccatgcgcatcgtgccgctcggcggtctgggtgagatcggccgcaacatgaacgtggtc
gaatacaatggacatatcctgctcatcgactgcggcgtgctcttcccggaagaggagcag
ccgggcgtggacctcatcctgcctgacttccactacatcaaggaccgtctcgacaaggtc
gaggcgctcgtgctcacccacggccacgaagaccacatcggtggcgtgccgtacctgctc
aagctccgcccggacattccgctgatcggctccaagctcaccctcgccttcgttgaggcc
aagtgcaaggaacaccgcatcaacccgacgctcgtcgaggtcaagggacgcgacaagctc
aaggtcggcccgttcaacctggaattcgtgaacgtcacgcactccattccggacgcgctc
gccgtgttcgtgcagacccccgccggctctctcatcgacaccggcgacatcaagctcgac
cagctgccgctcgaccaccgcatcaccgatctggtggaattcggcaagctcggcgaaaag
ggcgtggacctcctgatgatggactccaccaacgccgaggtcccgggcttcgtcaagccg
gagacctccatcggtccggcgctcgaccaggcgttcgcacaggccactcgcaagatcatc
gtggccagcttctccagccacgtgcaccgcgtgcagcaggtcgtcgacgcggcccacaag
tacggccgcaaggtcgtgttcgtcggacgttccatggtccgcaacatgtccatcgcagca
gatttgggctacctgcgtctgcccgaggacactgtcatcgacctgaagcaggcccatgac
gtgcaggacgacaagctcgtctacatgtgcaccggctcccaaggcgagccgatggccgcg
ctcggccgcatcgccgacggcaaccatcgtgacatcaccatcaacgagttcgacacggtg
atcctcgccagctccctgatcccaggcaacgagcatggcgtctacaaggtcatcaacaag
ctcgtgcagctcggagcccgcgtggtcaaccgagacaacgccgccgtgcacgtctccggc
cactgcaacgaaggcgaactgctgtacatgtacaacatcgtcaagccgaagtgcgccatg
cctatccacggcgaaaaccgccacttggtggccaacggcatgatcgccgtcaagaccggc
gtcgatccgcagaacgtcgtgctggccgaagacggcgacgtcgtcgacctgtaccacggc
caggccgcggtcgtcggctccgtgccgtgcggctacgtctacgtcgatggcgattccgtc
ggcgaactgaccgacgaagaactcgagaagcgccgcatcctcggcaccgaaggcttcgtg
tccagcttcgtggtcgtcgacaccgagaccgcggatgtcatcaccggtccgaagatctac
ctcaacgcggtcgcggaagacgaaagcgagttcgacaaggtccgtcaccagatcgtcgag
cagctgcaggacgcgatgatgcagggcacgcgcgacacctacaagctgcagcagatcatg
cgacgcacgctcggcggctgggtggcacgacagctgcaccgcaagccgatgatcgtcccc
gtcgtcgccgacatcgcgcaggacgtggatgacgcgatgggactgaacgccgcgaaataa
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