Burkholderia ambifaria AMMD: Bamb_1003
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Entry
Bamb_1003 CDS
T00398
Name
(GenBank) RNA polymerase, sigma-24 subunit, RpoE
KO
K03088
RNA polymerase sigma-70 factor, ECF subfamily
Organism
bam
Burkholderia ambifaria AMMD
Brite
KEGG Orthology (KO) [BR:
bam00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bam03021
]
Bamb_1003
Transcription machinery [BR:
bam03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Bamb_1003
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4_2
Sigma70_r4
Sigma70_ECF
HTH_23
HTH_16
Phage_antitermQ
IDEAL
Motif
Other DBs
NCBI-ProteinID:
ABI86562
UniProt:
Q0BH11
LinkDB
All DBs
Position
1:1091576..1092175
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AA seq
199 aa
AA seq
DB search
MSEKEIDQALVERVQKGDKAAFELLVSKYHRKIIRLISRLVRDPAEVEDVAQDAFIKAYR
ALPQFRGESAFYTWLYRIAVNTAKNYLATQGRRAPTSTEADAEEAETFSDADQLRDINTP
ESMLMSKQIAETVNAAMAVLPEELRQAITLREIEGLSYEEIAEMMDCPIGTVRSRIFRAR
EAIAAKLRPLLDTPEGKRW
NT seq
600 nt
NT seq
+upstream
nt +downstream
nt
gtgagtgaaaaagaaatcgatcaggctctggtcgagcgcgtacagaaaggcgacaaggcg
gcgttcgaactcctggtctccaaataccaccgcaagatcattcggctgatctcgcgcctc
gtgcgggatcccgccgaggtcgaggatgtggcccaggatgcgttcatcaaggcgtatcgt
gcgttgccgcagttccgcggcgagtcggcgttctacacgtggttgtaccggattgccgtc
aatacggcgaagaactaccttgcgacgcagggccgccgggcaccgacctccacggaggcc
gatgccgaggaagcggaaactttctccgacgcagaccaactaagggatatcaacacgcct
gagtcgatgttgatgagcaagcagattgccgagacggtcaacgctgcaatggccgtcctg
cccgaagagttgcgccaggcgattacgctgcgtgagatcgagggcctgagctacgaagag
atcgcggaaatgatggattgtccgatcgggacggtccggtcgcggatcttccgggcgcgc
gaggcaatcgctgctaaattgcgtccgctgctcgatacgcccgaaggcaagcgctggtaa
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