Burkholderia ambifaria AMMD: Bamb_4629
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Entry
Bamb_4629 CDS
T00398
Name
(GenBank) MscS Mechanosensitive ion channel
KO
K05802
potassium-dependent mechanosensitive channel
Organism
bam
Burkholderia ambifaria AMMD
Brite
KEGG Orthology (KO) [BR:
bam00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
bam02000
]
Bamb_4629
Transporters [BR:
bam02000
]
Other transporters
Pores ion channels [TC:
1
]
Bamb_4629
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MS_channel_2nd
DUF3772
MS_channel_3rd
MS_channel_1st
MoCF_biosynth
Gp_dh_C
AATF-Che1
ATG17_like
Motif
Other DBs
NCBI-ProteinID:
ABI90179
UniProt:
Q0B6P4
LinkDB
All DBs
Position
2:1598333..1600831
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AA seq
832 aa
AA seq
DB search
MSIQRLSTYARRIALFALLQFAALATASAFPGAASAPSASGVGVPVPTISLSDAVAQLKQ
MQVQQDRIKQQTSNATNSKELDGLGEATQELSADVEKLQSELAPQRTQIQAQLDVLGPPP
APGASPETPAVAQQRATLNARKTQIEAALKQAADQKANLANLNDQFAKLHRSLLRNQLAF
RSGSIFGAQFWLPLFHLSPDDVQRLDDFNDELRDMLRSSWTPGQRAITTLLLIAALAVWL
GGRRLVERGLAWFCLNRLPPTRLRRSALALATAFSTLLATAVAVQVLYLALARHYELTPS
MSDLWDQFAKLAVTCALIAGLGRALLCTKHPSWRLPALADPVALAMRPFPGVLAALLLMS
GTLESINRIVDTSLSVTLLGRGIVSLVVALTVGASILRANRVRTALAASGEAPEERSTLA
GLIHAGVTLAIVVSLVALLIGYITVARFITYELVWFEIVLCSVYILTQLTRDASESLFSA
NLSSGKQIKHLFALDDRHLEQAHTVVSGLGTSLLMLVAAIALVTGGFGTTPSDLLDSAIA
MIGGQRLQSLNIMPDRILNAVIGFAIGFYLLRSVRRWLDNEFMPALGMDAGMRVSLVTLF
TNVGYVLLVLMTLGLLGVRWSNLAWIVSALSVGIGFGLQEIVKNFVSGLILLTERPVKVG
DMVSIAGVEGDIRRINVRATEIQLSDRSTVIVPNSQLISQNVRNVTMGNSTQGVATLTLT
FPLNTDPVQVRDLLLDAYREHPAILDKPAPSVTFSQLAPDGITLSVTGYVASPRIAASTK
SDLLFEILKQLRAAQITLSTPQMLVVQNMPTLENSPQHEPEANPRLHAGRSS
NT seq
2499 nt
NT seq
+upstream
nt +downstream
nt
atgtccatacaacgactctccacctacgcacgccggatcgcgctgttcgcgttgctgcag
ttcgctgcgctcgcgaccgcgtcggcgtttccgggcgccgcatccgcgccgagcgcgagc
ggcgtcggcgtccccgtgccgaccatctcgctgagcgacgcggttgcgcagctcaagcag
atgcaggtgcaacaggaccgcatcaagcagcagacgtcgaacgcgaccaacagcaaggag
ctcgacgggctcggcgaagcaacgcaggaactgagcgccgatgtcgagaagctgcagagc
gagctcgcgccgcagcgcacgcagatccaggcccagctcgacgtgctcggcccgccgccg
gcgccgggcgcgtcgcccgaaacgcccgcggtcgcgcagcagcgggcgacgctgaacgcg
cgcaagacgcagatcgaagcggcgctgaagcaggcggccgaccagaaggccaacctggcg
aacctgaacgaccagttcgcgaaactgcaccgcagcctgctgcgcaatcagctcgcgttc
cgttcgggcagcatcttcggcgcgcaattctggctgccgctgttccatctgtcgccggac
gatgtccagcgcctcgacgacttcaacgacgaactgcgcgacatgctgcgctcgtcgtgg
acacccggccagcgcgccatcaccacgctgctgctgatcgccgcgctcgcggtgtggctc
ggcggccgccgcctcgtcgagcgcgggctcgcgtggttctgcctgaaccgtctgccgccc
acccggctgcgccgcagcgcactggcgctggcgaccgcattctcgacgctgctggcgacc
gcggtcgccgtgcaggtgctctatctcgcgctcgcgcgccactacgagctcacgccgtcg
atgagcgatctgtgggaccagttcgcgaagctcgccgtgacctgcgcgctgatcgccggc
ctcggccgcgcgctgctctgcaccaagcatccgtcgtggcggctgccggcgctcgccgat
cccgtcgcgctcgcgatgcggccgttccccggcgtgctggccgcgctgctgttgatgtcc
ggcacgctcgaatcgatcaaccggatcgtcgataccagcctgtccgtcacgctgctcggc
cgcggcatcgtatcgctcgtcgtcgcgctgaccgtcggcgcgtcgatcctgcgcgcgaac
cgcgtacgcaccgcgctcgcggcatccggcgaggcgcccgaggagcggtcgacgctcgcg
gggctgatccatgcgggcgtcacgctggcgatcgtcgtgtcgctcgttgcgctgctgatc
ggctacatcacggtcgcgcgcttcatcacgtacgagctcgtatggttcgagatcgtgctg
tgcagcgtctacatcctgacgcagctcacgcgcgacgcgagcgaaagcctgttctccgcg
aacctgtcgagcggcaagcagatcaagcacctgttcgcgctcgacgaccggcatctcgag
caggcgcacaccgtcgtgtccgggctcggcacgagcctgctgatgctggtcgcggccatc
gcgctggtgacgggcggcttcggcacgacgccgagcgacctgctcgacagcgcgatcgcg
atgatcggcggccagcggctgcagagcctgaacatcatgcccgaccggatcctgaacgcc
gtcatcgggttcgcgatcggcttctacctgctgcgctcggtgcgccgctggctcgacaac
gaattcatgccggcgctcggcatggacgcgggcatgcgcgtgtcgctggtcacgctgttc
accaacgtcggctacgtgttgctcgtgctgatgacgctggggctgctcggtgtccggtgg
agcaacctcgcgtggatcgtcagcgcgctgtcggtcggtatcggtttcggcctgcaggag
atcgtgaagaacttcgtgtcggggctgatcctgctgaccgagcggccggtgaaggtcggc
gacatggtcagcatcgcgggcgtcgaaggcgacatccgccgcatcaacgtgcgcgcgacc
gagatccagctcagcgatcgttcaaccgtgatcgtgccgaactcgcaactgatctcgcag
aacgtgcgcaacgtgacgatgggcaacagcacgcaaggcgtcgcgacgctgacgctgacg
ttcccgctgaacaccgatcccgtgcaggtgcgcgacctgctgctcgatgcgtatcgcgaa
cacccggcgattctcgacaagccggcgccgtcggtcacgttcagccagctggcgccggac
gggatcacgctgagcgtgacgggctacgtggcgagcccgcggatcgcggcctcgaccaaa
agcgacctgctgttcgagatcctgaagcagttgcgcgcggcgcagatcacgctgtcgacg
ccgcagatgctggtcgtgcagaacatgccgacgctcgagaattccccgcagcacgagccg
gaagcgaacccgcggctgcacgctggtcgatcctcgtag
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