Bacillus velezensis NAU-B3: BAPNAU_3915
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Entry
BAPNAU_3915 CDS
T02859
Symbol
rocR
Name
(GenBank) Arginine utilization regulatory protein rocR
KO
K06714
arginine utilization regulatory protein
Organism
bamb
Bacillus velezensis NAU-B3
Brite
KEGG Orthology (KO) [BR:
bamb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bamb03000
]
BAPNAU_3915 (rocR)
Transcription factors [BR:
bamb03000
]
Prokaryotic type
Helix-turn-helix
Other families
BAPNAU_3915 (rocR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
HTH_8
AAA_5
PAS_9
HTH_30
HTH_50
Mg_chelatase
AAA
PAS_4
AAA_3
AAA_16
PAS_10
PAS
AAA_2
AAA_7
HTH_28
MCM
HTH_7
AAA_19
DUF3929
LAGLIDADG_WhiA
PAS_7
Sushi_2
Motif
Other DBs
NCBI-ProteinID:
CDH97695
LinkDB
All DBs
Position
4110194..4111609
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AA seq
471 aa
AA seq
DB search
MLRRLRGGIDLHTTSEFYTLVLQSILEEIDVGLHVVDEKGSTVIYNKKMMQIEDMDERDV
LHKNLTDVFMFSNQQDSTLVQALQEGKTIKNVKQSYFNNKGQEITTINHTFPIVQNGEIK
GAVEIAKDVTKLERLIRENMHRKEQNSYTFDSILGNSPVIREVIENAKRATRTSSSVLLA
GETGTGKELFAQSIHNGSQRSGAPFISQNCAALPDSLVESILFGTKKGAFTGAIDQPGLF
EQAQGGTLLLDEINSLNLSLQAKLLRALQEKKIRRIGSAQDKPIDVRIIATMNEDPITAI
SEERLRKDLYYRLSVVTLIIPPLRERKEDILPLAEVFIQKNNHLFQMHVDSISDDVQRFF
LEYDWPGNIRELEHMIEGAMNFMTDETTITAAHLPYQYRMKIKPADTETKAVASTQPGTD
LKDKMENFEKYMIEKTLRKHGNNISKTANELGISRQSLQYRLKKFGLDRMK
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
atgttaagacgattgagagggggaattgacctgcacacaaccagcgaattttacacactc
gtgttacaaagcattctggaagagattgatgtcgggctgcatgtggtggacgagaagggc
agcaccgtcatttacaataagaaaatgatgcagattgaagatatggatgaacgggacgtc
ctgcataaaaacctgactgatgtatttatgttttccaatcagcaggacagcacgctcgtt
caggcccttcaagaaggcaaaacgattaaaaacgtgaagcaaagctatttcaataacaaa
ggccaggaaatcacgacgatcaaccacaccttcccgattgtgcaaaacggcgaaatcaag
ggcgccgtagaaatcgccaaggacgtcaccaagctcgaacggctgatcagggagaacatg
cacaggaaagaacagaacagctacacgtttgacagtattctcggcaacagcccggttatt
cgggaagtcatcgaaaacgcgaaacgggcaacccgtacgtcatcgtccgttcttttggcc
ggcgagacgggaacgggcaaggaactgtttgcccaaagcattcacaacggcagccagcgc
tcaggcgccccgttcatctcacaaaactgcgccgccctgccggacagtctggtcgaaagt
attttattcggcacgaaaaaaggcgcctttaccggagccatcgaccagcccggcttattt
gagcaggcgcagggaggcaccctgctccttgatgagatcaactctctcaatctcagcctg
caggcaaaactgctccgcgcccttcaggaaaagaaaatccggcgcatcggatcagctcag
gacaaaccgattgacgtccgcatcatcgccacgatgaatgaagacccgatcaccgccatt
tcagaagagcggctgcgcaaagatttatactaccgcttaagcgttgtcacgctgatcatt
cccccgctccgggagcgcaaggaagatattctgcctctggccgaagtctttatccagaaa
aacaatcacctgttccaaatgcatgtcgattcgatcagtgacgatgtgcagcgattcttc
ctggaatatgactggccgggcaacatccgcgagcttgaacatatgattgaaggcgccatg
aactttatgacggatgaaacgacgattacggcggcccacctgccttaccaataccggatg
aaaatcaaacccgctgacacggaaaccaaagccgtcgcaagcacccagcccggcaccgat
ttaaaagacaaaatggaaaacttcgaaaaatacatgatcgaaaaaaccctgagaaaacac
ggcaataacatatccaaaacggcaaacgagctcggaatcagcagacagagcctgcaatac
cgcctgaaaaaattcggtctggaccggatgaaatga
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