Bacillus amyloliquefaciens IT-45: KSO_000435
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Entry
KSO_000435 CDS
T02462
Name
(GenBank) arginine utilization regulatory protein RocR
KO
K06714
arginine utilization regulatory protein
Organism
bami
Bacillus amyloliquefaciens IT-45
Brite
KEGG Orthology (KO) [BR:
bami00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bami03000
]
KSO_000435
Transcription factors [BR:
bami03000
]
Prokaryotic type
Helix-turn-helix
Other families
KSO_000435
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
HTH_8
AAA_5
PAS_9
HTH_30
Mg_chelatase
AAA
PAS_4
AAA_3
HTH_50
AAA_16
PAS
PAS_10
AAA_7
AAA_2
HTH_7
MCM
HTH_28
AAA_19
DUF3929
LAGLIDADG_WhiA
PAS_7
Sushi_2
Motif
Other DBs
NCBI-ProteinID:
AGF25596
LinkDB
All DBs
Position
complement(80061..81464)
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AA seq
467 aa
AA seq
DB search
MRGGIDLHTTSEFYTLVLQSILEEIDVGLHVVDEKGSTVIYNKKMMQIEDMDERDVLHKN
LTDVFMFSNQQDSTLVQALQEGKTIKNVKQSYFNNKGQEITTINHTFPIVQNGEIKGAVE
IAKDVTKLERLIRENMHRKEQNSYTFDSILGNSPVIQEVIENAKRATRTSSSVLLAGETG
TGKELFAQSIHNGSQRSGAPFISQNCAALPDSLVESILFGTKKGAFTGAIDQPGLFEQAQ
GGTLLLDEINSLNLSLQAKLLRALQEKKIRRIGSAQDKPIDVRIIATMNEDPITAISEER
LRKDLYYRLSVVTLIIPPLRERKEDILPLAEVFIQKNNHLFQMHVDSISDDVQQFFLEYD
WPGNIRELEHMIEGAMNFMTDETTITAAHLPYQYRMKIKPADTESKAAASTQPGTDLKDK
MENFEKYMIEKTLRKNGNNISKTANELGISRQSLQYRLKKFGLDRMK
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
ttgagagggggaattgacctgcacacaaccagcgaattttacacactcgtgttacaaagc
attctggaagagattgatgtcgggctgcatgtggtggatgagaagggcagcaccgtcatt
tacaataagaaaatgatgcagattgaagatatggatgaacgggacgtcctgcataaaaac
ctgactgatgtatttatgttttccaatcagcaggacagcacgctcgttcaggcccttcaa
gaaggcaaaacgattaaaaatgtaaagcagagctatttcaataacaaaggccaggaaatc
acgacgatcaaccacaccttcccgattgtgcaaaacggcgagatcaagggcgccgtggaa
atcgccaaggacgtcaccaagctcgaacggctgatcagagagaacatgcacagaaaagaa
cagaacagctacacgtttgacagcattctcgggaacagcccggtcattcaggaagtcatc
gaaaacgcgaaacgggcaacccgtacatcatcgtccgtgcttttggccggcgagacggga
acaggcaaggagctgttcgcccaaagcattcacaacggcagccagcgctcaggcgccccg
ttcatctcacaaaactgcgccgccctgccggacagtctggtcgaaagtattttattcggc
acgaaaaaaggcgcctttaccggagccatcgaccagcccggcttatttgagcaggcgcag
ggaggcaccctgctcctcgatgagatcaactctctcaatctcagcctgcaggcaaaactg
ctccgcgcccttcaggaaaagaaaatcaggcgcatcggatcagctcaggacaaaccgatt
gacgtccgtatcatcgccacgatgaatgaagacccgatcaccgccatttcagaagagcgg
ctgcgcaaagatttatactaccgcttaagcgttgtcacgctgatcattcccccgctccgg
gagcgcaaggaagacattctgcctctggccgaagtgtttattcagaaaaacaaccacctg
tttcaaatgcatgtcgattcgatcagtgacgatgtgcagcaatttttcctggagtatgac
tggccgggcaacatccgcgagcttgaacatatgattgaaggcgccatgaactttatgacg
gatgaaacgacgattacggcggcccacctgccttaccaataccggatgaaaatcaaaccc
gctgacacggaaagcaaagcagccgcaagcacccagcccggcacagatttaaaagacaaa
atggaaaacttcgaaaaatacatgatcgaaaaaaccctgagaaaaaacggcaataacata
tccaaaacggcaaacgagctcggaatcagcaggcagagcctgcaataccgcctgaaaaaa
ttcggtctggaccggatgaaatga
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