KEGG   Bacillus amyloliquefaciens IT-45: KSO_009145
Entry
KSO_009145        CDS       T02462                                 
Name
(GenBank) bifunctional ATP-dependent DNA helicase/DNA polymerase III subunit epsilon
  KO
K03722  ATP-dependent DNA helicase DinG [EC:5.6.2.3]
Organism
bami  Bacillus amyloliquefaciens IT-45
Brite
KEGG Orthology (KO) [BR:bami00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:bami03400]
    KSO_009145
Enzymes [BR:bami01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.3  DNA 5'-3' helicase
     KSO_009145
DNA repair and recombination proteins [BR:bami03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    KSO_009145
SSDB
Motif
Pfam: Helicase_C_2 RNase_T DEAD ResIII DEAD_2 Rv2179c-like DEDDh_C Helicase_C DUF2660
Other DBs
NCBI-ProteinID: AGF27326
LinkDB
Position
1763941..1766727
AA seq 928 aa
MNKQRFVVIDVETTGNSPKKGDKIIQIAAVVIENGQITERFSKYINPNQAIPPFIEQLTG
ISSGMVENELPFEAVAEEIFHLLDGAYFVAHNIHFDLGFVRHELSEAGYELPDCEVLDTV
ELSRIVFPGFEGYKLGELCAELNIVHDRPHRADSDAEVTGLVFLDILHKLKHLPLPTLKQ
LRRLSQHFISDLTLLLDSFIHESRPAEEKSCIPYASFSIKEPDHIPVSRPVNAAIDLEKW
NEEKEQILSGIIPRYEKRKGQLTMMDEVLGAFRNREHALIEAAPGIGKTIGYLVPAVLFA
KAEQTPVIISTYSTLLQQQIMSKDLPLLERMFPWPVKAAILKGKSHYLCLPKFEHILHEE
DDNYDAVLTKAQLLVWLTETETGDAAELNLPSGGRLLWERMAYDENSFMKKGKDSAAGFY
ERAKEKAQAADLIITNHALLFSDQSSETKKLPASGTVIIDEAHHFERAASEHLGKRASYI
GLHTKLSRIGTLKEHGLLKRMRKLFYTYELPAESFFDADEWMKHIQSESDAFFSSVHSFV
KRRKPKDDLNRLVYSLNHKSQDKGFHMITDGAERLCAMLDQLLDMFSVQEKLLHQKLDQM
KSGAAFLAGEYVKCIRGLKEYRDTFSRLLFENDEKEAVWVEIDAKGAKNAVSIYAQPLEP
GEMLADQFFARKKSVVLTSATLMVEQSFQFMIERLGLADFYPRTKSILSPFSYDDQMNVI
IPKEMKSVKYDGEREVIEHIAKYAEIMSKGKQPKILVLFTSHDMLKKVYQELKLSMEISG
IQLLAQGISGGSPGKLMKTFKTASRAILLGTNHFWEGVDFPGDELSTVMIARLPFRAPDN
PLHAAKCEFAKKQGKNPFQTISLPEAVLTFRQGIGRLLRTAGDKGTIVLLDQRVKTAGYG
RLFLEALPTSSLLELTDAELGAYVSQTE
NT seq 2787 nt   +upstreamnt  +downstreamnt
atgaacaaacaacggttcgttgtcatagatgtcgaaacaacaggaaattcgccgaaaaag
ggcgataaaatcattcaaatcgcagcggttgtcattgaaaatggacaaataactgagcgg
ttttcaaaatatatcaatccgaatcaggccatcccgccgtttattgaacagctgaccgga
atttcgtccggaatggttgaaaatgaactgccgtttgaagcggtcgcagaggagattttt
catctgcttgacggcgcgtattttgttgcccacaatattcatttcgacctcggatttgtc
cggcatgaactgagcgaagcgggctatgagctgccagattgtgaagtgcttgatacggtt
gagctttcgcgtattgttttcccggggtttgaaggatataagctcggtgagttgtgcgcg
gagctgaatattgttcatgaccgccctcaccgcgcagacagcgatgcggaggttacgggc
ctggtctttttagacattttacataaactgaaacatctgcctttaccgacgttaaagcag
cttagaaggctttcacagcattttatcagcgatttgacgctgcttttggattcttttata
catgaaagcaggccggcggaagaaaagagctgcattccatacgcctctttttcaattaaa
gagcccgatcacattccggtttcccgtccggtgaatgcagccattgaccttgaaaagtgg
aacgaagaaaaagaacagatcttgtccggcatcatcccccgctatgaaaagcggaaagga
cagcttacgatgatggatgaagtgcttggcgccttccgcaatcgggagcatgcgctgatt
gaagcggcgcccggcatcggaaaaacgatcggttatctcgttccggctgttttatttgcc
aaagcggaacaaactcccgtcattatcagcacgtactctactcttttgcagcagcagatc
atgtctaaagatcttccgcttttggagcgtatgtttccttggccggtcaaagctgctatt
ttaaaagggaaatcacattatctgtgcctgccgaagtttgaacatattctgcatgaggaa
gatgacaactatgatgcggttttgacgaaagcgcagcttctcgtctggctgacggagact
gaaacgggcgacgccgctgagctgaatcttccatcaggcggcagattgctgtgggagcgc
atggcttacgatgagaattcttttatgaaaaaagggaaggactcggctgcggggttttat
gaacgggctaaagaaaaagcgcaggccgcagatctgattatcacaaaccatgctttgctg
ttttcagatcaaagcagtgaaacgaaaaaactgcctgcaagcggaacggtcatcattgat
gaagcgcatcatttcgaacgcgccgccagcgagcacctggggaagagagcttcatacatc
ggactgcacacaaagctcagccgaatcgggaccttaaaggaacacggactgttaaagcgg
atgagaaaactgttttatacgtatgaactgccggcggaaagtttttttgacgccgatgag
tggatgaagcatattcaatcggaaagcgacgcatttttcagttcagtgcattcttttgtc
aaacgaagaaaacctaaagacgatctgaaccgtctcgtctatagtctcaatcataaaagc
caggataaggggtttcacatgataacagacggagcggagcggctttgtgcgatgctggat
cagctgcttgacatgttttccgtacaggagaaactgttacaccaaaagcttgatcagatg
aaaagcggagcggcttttttagcgggcgaatatgtaaagtgtatcagggggctgaaagaa
tatcgcgatacgttcagcaggctgctgtttgaaaatgatgagaaagaagccgtttgggtt
gaaattgatgcgaagggcgcaaaaaatgccgtcagcatctatgcgcagcctttggagccc
ggtgaaatgctggcagaccagtttttcgcccgcaaaaaaagcgttgtgctcacatcagcg
accttaatggtggagcagtcttttcaatttatgattgaaaggctcggacttgcggatttt
tatccgcgcaccaaaagcatcctgtctcctttttcttacgatgatcagatgaacgtcatc
attccgaaagagatgaaatccgttaaatatgacggggagcgggaagtcattgagcatatt
gccaagtatgcagaaatcatgtcaaagggaaaacagccgaagatccttgtcctgtttacg
tctcatgatatgctgaaaaaagtgtatcaggaactgaaactcagtatggagatctcaggc
attcagcttctcgcccaaggtatttcaggcgggagtcccggtaaattaatgaaaaccttt
aaaacggcaagccgggcgattttgctcgggacgaatcatttctgggaaggcgttgatttt
ccgggggatgaattgtcaaccgtcatgatcgcaagacttcctttcagggcgcctgataat
ccgcttcacgccgcaaaatgcgaatttgccaagaagcaggggaaaaatccgtttcagacg
atttccctgcctgaggccgtgttaacgttcagacaggggatcgggcgcctgctccgtacg
gcgggagacaagggaacgatcgttcttttagatcagcgtgtaaagacggcgggatacgga
cggctgtttcttgaagcgctcccgacttcatcccttttggagctgacggatgccgaactc
ggggcttatgtcagccaaacggaataa

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