Bacillus velezensis TrigoCor1448: AJ82_00605
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Entry
AJ82_00605 CDS
T03161
Name
(GenBank) RNA polymerase factor sigma-70
KO
K27000
RNA polymerase sigma-H factor
Organism
bamt
Bacillus velezensis TrigoCor1448
Brite
KEGG Orthology (KO) [BR:
bamt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bamt03021
]
AJ82_00605
Transcription machinery [BR:
bamt03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
AJ82_00605
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4_2
GerE
HTH_23
HTH_16
Lebercilin
HTH_38
HTH_Tnp_Tc3_1
Sigma70_r4
Motif
Other DBs
NCBI-ProteinID:
AHK47727
LinkDB
All DBs
Position
111801..112457
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AA seq
218 aa
AA seq
DB search
MNLQNSKGKFNKVQFCQLEDEQVIEKVHVGDSDALDYLITKYRNFVRAKARSYFLIGADR
EDIVQEGMIGLYKSIRDFREDKLTSFKAFAELCITRQIITAIKTATRQKHIPLNSYVSLD
KPIFDEESDRTLLDVISGAKTLNPEEMIINQEEFDDIEMKMGELLSDLERKVLVLYLDGR
SYQEISDDLNRHVKSIDNALQRVKRKLEKYLEIREISL
NT seq
657 nt
NT seq
+upstream
nt +downstream
nt
gtgaatctacagaacagcaagggaaagttcaacaaagtgcaattttgccagttggaggac
gagcaggtcattgaaaaggttcatgttggggatagtgatgcgttagattacttgattacg
aagtaccgtaattttgtacgggcgaaagcaaggtcttattttttaataggggccgacaga
gaagatattgtacaggaagggatgataggcttatataagtctatccgagactttagagag
gacaagcttacttcatttaaagcttttgcagaattatgcattacccgccagattattacc
gcaataaagacagctacccgtcagaaacacattcctttaaattcctatgtttctttagac
aaacctatttttgatgaagaatctgacagaacactgcttgatgtcatttcaggcgctaaa
acgttaaatcctgaagagatgattattaatcaggaagaatttgatgatatcgaaatgaaa
atgggagaactgctgagcgatctggagagaaaggtgcttgttttgtacttggacggaaga
agttaccaagagatttcagatgacttaaaccgacacgtaaaatcaatcgataatgccctg
cagcgcgtgaagcgcaagcttgaaaagtatttagaaataagagagatcagcctgtag
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