Bacillus velezensis SQR9: V529_11110
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Entry
V529_11110 CDS
T03384
Symbol
yjbO
Name
(GenBank) ribosomal large subunit pseudouridine synthase D
KO
K06180
23S rRNA pseudouridine1911/1915/1917 synthase [EC:
5.4.99.23
]
Organism
bamy
Bacillus velezensis SQR9
Brite
KEGG Orthology (KO) [BR:
bamy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
bamy03009
]
V529_11110 (yjbO)
Enzymes [BR:
bamy01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.23 23S rRNA pseudouridine1911/1915/1917 synthase
V529_11110 (yjbO)
Ribosome biogenesis [BR:
bamy03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
V529_11110 (yjbO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
TGS
WYL_3
Motif
Other DBs
NCBI-ProteinID:
AHZ15137
LinkDB
All DBs
Position
1175520..1176413
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AA seq
297 aa
AA seq
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MDNFFIQKNMTAREAGMTVKEYTAQLGISKRLLADIKFGGGDLLVNGEHVTVRTVLTDGD
VLKIEFPKEHVSETLLPEPVPLDILYEDDHVLVVNKQPYVSSIPSREHPSESIANGVISH
YRKSGVQSTVHLVTRLDRDTSGAMLIAKHRLSHSLLSAAQKKGLVSRRYLAVVHGIMLQK
EGTVDAPIGRKHDSIIERMVTPEGQRAVTHFQTEKAGHAFTLAALRLETGRTHQIRVHMS
YLGHPLVGDTLYGGKNEGIARQALHSERLSFVHPMTGETLVFHAPVPDDMKTLIEHM
NT seq
894 nt
NT seq
+upstream
nt +downstream
nt
ttggacaacttttttatccaaaagaacatgactgcccgggaagccggcatgacggtaaaa
gaatatacggcgcagctcggcatttcaaagcggcttctcgctgacattaaattcggcggg
ggagacctgcttgtgaacggagagcatgtaaccgtccgcaccgtgttaacggacggagat
gtgcttaagattgaatttccgaaggagcatgtgagtgaaacgcttttgcctgagccggtt
ccgcttgatattctttatgaagatgaccatgtgcttgtggtcaataaacagccgtatgtc
tcctcaattccatcaagagaacacccgtcggaaagcatcgctaacggagtgatcagccac
taccgaaaaagcggcgtgcaatcaacggttcatcttgtcacccgccttgacagggataca
tcgggggcgatgctcatcgccaaacatcggctttcccattctcttttgtcggcagcgcag
aagaaggggcttgtcagcaggcggtatctcgctgtcgtacacgggatcatgctgcagaag
gaaggaacggtggacgcgccgatcggaagaaaacacgacagtattattgagcggatggta
acgccggagggacaacgagcggtgacgcattttcaaacggaaaaagcgggacatgcgttt
acgcttgcagccctgcggctggaaacggggcggacgcatcaaatccgggtgcacatgagc
tacctcggccatcctttagtcggtgatacactgtacggcggaaaaaatgagggaattgcg
cggcaggctcttcacagtgagcggctttcattcgtacaccccatgaccggagaaacgctc
gtttttcacgctccggtgcctgacgatatgaaaacattaattgaacacatgtaa
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