Bartonella ancashensis: PU02_1212
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Entry
PU02_1212 CDS
T04086
Name
(GenBank) Uracil-DNA glycosylase, family 4
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
banc
Bartonella ancashensis
Pathway
banc03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
banc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
PU02_1212
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
banc03400
]
PU02_1212
Enzymes [BR:
banc01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
PU02_1212
DNA repair and recombination proteins [BR:
banc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
PU02_1212
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Fib_alpha
Motif
Other DBs
NCBI-ProteinID:
ALE04026
UniProt:
A0A0M4L8Z0
LinkDB
All DBs
Position
1318625..1319452
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AA seq
275 aa
AA seq
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MSQITHCPISYEELLNFYKESGADTALTDTPVNHFHKSHSAENEVKQISDISHNKQTLSS
LEQKSTSSYESDKMRFKDSIEEMVKNIKTLDELKSALLSFDGCSLKLTAKNTCFSDGTAG
SPLMLIGEAPGREEDIQGIPFVGRAGMLLNKILASIGLTRENVYIANTIPWRPPGNRTPT
PREIALCRPFIERQIQLANPRVLVALGGTAVQFFTGTQSGIIRMRGKWLTYETADNIKIP
VMPTFHPAYLLRTPSQKKLTWTDFLEVKSFLSNLT
NT seq
828 nt
NT seq
+upstream
nt +downstream
nt
atgtcacaaataacccactgcccaatatcatatgaagaacttttgaatttctacaaagaa
agtggtgccgatactgctctgacagatacacctgttaaccacttccataaatcacattct
gcagaaaatgaagttaaacaaataagcgacatctcccataataaacaaacgttatcttct
cttgaacaaaagagcacttcatcctacgaatctgacaaaatgcgattcaaggactcaata
gaagagatggtaaaaaatatcaaaacacttgatgaattgaaatctgctctcctttctttt
gatggctgctcactaaaattgacagcaaaaaacacttgtttttcagatggaacagcagga
agccctctaatgctcataggtgaagctccaggacgagaagaagatatacaaggcatcccc
tttgtgggaagagcaggtatgctactcaataaaatacttgcttctatcggcttaaccaga
gaaaatgtttacatagccaatactattccatggcgaccacctgggaatcgcacacccaca
ccaagagaaatagctctgtgtcgccctttcattgaacgtcaaattcagcttgctaaccct
cgcgtcctcgtggcactaggaggaaccgctgtacaattttttacaggaacccaaagtggc
attatccgtatgagaggaaaatggttaacctatgaaactgctgacaacattaaaatacct
gttatgccaacttttcaccctgcctacctcctacgaaccccaagccaaaaaaaacttaca
tggacagactttttggaagtaaaaagttttttaagcaatcttacgtaa
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