Borrelia anserina: N187_01105
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Entry
N187_01105 CDS
T04727
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
bane
Borrelia anserina
Pathway
bane03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bane00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
N187_01105
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bane03021
]
N187_01105
03019 Messenger RNA biogenesis [BR:
bane03019
]
N187_01105
Transcription machinery [BR:
bane03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
N187_01105
Messenger RNA biogenesis [BR:
bane03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
N187_01105
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Spore_III_AA
NACHT
AAA
AAA_25
AAA_22
OB_RNB
DUF1269
Motif
Other DBs
NCBI-ProteinID:
APR64720
LinkDB
All DBs
Position
complement(233353..234897)
Genome browser
AA seq
514 aa
AA seq
DB search
MDKKFEEFDLEDEMKRLNSSKELKIDDHSKKKVVKVVTKKESVSGGLKNSDIDKLKESHG
GSSDFDYDMSDPDLECSIKTLEQSNIISFLDGKDFIVIDSLYDKPITEIRKVVEGLGTNH
TIAVTMKKTELIFLLVKILTEHNIDVLFTGVLDVLSDGYGFLRTASNSYLSGGNDVYVSP
SQIRLFNLRTGDILYGQIRSPRDGERFFAMIKIKSINAQDPTFAQNRIPFDNLTPLYPNS
KLNLEYENCNISTRLINLFAPIGKGQRALIVSPPKAGKTTLLQKIANAITTNYPGIVLMI
LLIDERPEEVTDMIRGVKGEVIASNFDEQASRHVQVAEMVIEKAKRLVENKKDVVILLDS
ITRLARAYNQTMPTSGKILSGGVDSNALHKPKRFFGSARNIEEGGSLTIIATALVDTGSK
MDEVIFEEFKSTGNMELILDRSLADRRLFPAINIKKSGTRKEELLLNEEERSKILLIRKI
LGGVDDYEGVEALVEKMKKSKNNEIFLKTMSNGD
NT seq
1545 nt
NT seq
+upstream
nt +downstream
nt
atggataaaaaatttgaggaatttgatttagaggatgaaatgaagcgtttaaattcttct
aaggaattaaaaattgatgatcattctaagaaaaaggtggttaaggttgtcactaagaaa
gaatctgtttctggtggacttaagaactctgatattgataaattaaaagaatctcatggg
ggctcatcggattttgattatgatatgtctgatccggatttagaatgcagtattaagacc
cttgaacaaagtaatattattagttttttagatggcaaagattttatagttattgacagt
ctttatgataagccaattactgaaattaggaaagttgttgaaggacttggtactaatcat
actattgcagtaacaatgaaaaagacagaattaatatttctgcttgtcaagatattaact
gaacataatattgatgttttatttactggtgttctcgatgtgttgagtgatgggtatggt
tttttacgtacagcatctaattcttatctctcaggaggtaatgatgtttatgtttcacct
tctcagattaggctttttaatttaaggacgggtgatattttatatgggcagatcaggtct
ccaagagatggagagcgattttttgcaatgattaagattaagagcattaatgctcaagat
cctacgtttgcacaaaataggataccttttgataatttaacccctttatatcctaattca
aagttgaatcttgaatatgagaattgtaatatctccactaggcttattaatctttttgct
cctattggaaaaggacaaagagcattaatagtatcacctccaaaagctggaaagactact
ttgcttcaaaaaatagctaatgcaattactacaaattatccaggcattgtcttaatgatt
ttactcattgatgagagacccgaagaggtgactgacatgattcgtggtgttaagggagag
gtaattgcatctaattttgatgagcaagctagtaggcacgtgcaagttgcagagatggtt
attgagaaggcaaaaaggcttgttgaaaacaaaaaggatgttgttattcttttagattct
attacgagacttgcaagagcttataatcagactatgccaacttctggtaagatactctca
ggaggagttgattctaatgctttgcataagccaaaaaggttttttggttctgctagaaat
attgaggaaggtggtagtcttactattatagctacagctttagttgatactggtagtaag
atggatgaagttatatttgaagaattcaagagtactggtaatatggagttgattcttgat
agaagtttagctgatagaaggctctttcctgctatcaatattaagaaatctgggacaaga
aaagaagagctgcttttaaatgaagaggaacgctctaaaattttgcttattaggaaaatt
ttaggtggtgttgatgattacgagggagttgaggctttggttgaaaaaatgaaaaagagt
aaaaacaatgaaattttcttaaagactatgagtaatggggattag
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