Bifidobacterium animalis subsp. lactis Bl12: Bl12_1026
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Entry
Bl12_1026 CDS
T02712
Name
(GenBank) RNA polymerase sigma factor RpoD
KO
K03086
RNA polymerase primary sigma factor
Organism
bani
Bifidobacterium animalis subsp. lactis Bl12
Brite
KEGG Orthology (KO) [BR:
bani00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
Bl12_1026
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bani03021
]
Bl12_1026
Transcription machinery [BR:
bani03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Bl12_1026
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
DprA_WH
CDC27
Motif
Other DBs
NCBI-ProteinID:
AGO52544
LinkDB
All DBs
Position
complement(1271531..1272997)
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AA seq
488 aa
AA seq
DB search
MVAKETTSTEKAAKKKASESAHDEAAVEEKGKTTRRRASSKASSAKKGSAGKTTKRATAR
KKKDAAESESTPARKTRAASKTGAKKAISKSEEIDDEDMIGEDVIDEEDLDLDEDLDADE
NDDDLEDEESEDEPEPEEDDDEEPQAPKEPKEKGAFVVSDNDEDDEALLANPGVNPKRRV
VTTGATADPVKDYLKQIGRVSLLNAEQEVDLSERIEAGLYAQHLLDTEGDTMEFRRKREL
KWAAADGKKAKDHLLEANLRLVVSLAKRYTGRGMLFLDLIQEGNLGLIRAVEKFDWKKGF
KFSTYATWWIRQAITRAMADQARTIRVPVHMVEVINKLSRVQRQMLQDLGREPTPDELAR
ELDMPVEKVQEVQKYGREPISLHTPLGEDGDSEFGDLIEDTDAIAPSEAVAFSLLQEQFR
QVLETLSPREAGVIKMRYGLEDGQPKTLDDIGRVYGVTRERIRQIESKTMSKLRHPSRSQ
TLRDFLDQ
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
ttggtcgccaaggaaacgacgagcaccgagaaagccgcgaagaagaaggcctccgaaagc
gcccacgacgaagccgccgtcgaagagaagggcaagaccacccgtaggagggcctcctcg
aaggcttcgtcggcgaagaagggctccgccggcaagaccaccaagcgtgccacggcccgg
aagaagaaggatgccgccgagagcgagtcaacgccggcaaggaagactcgtgcggcttcg
aagaccggcgcgaagaaggccatttccaagtccgaggagatcgacgacgaggacatgatc
ggtgaggatgtgatcgacgaggaggatcttgacctcgatgaggatcttgacgccgacgag
aacgatgacgacctcgaggacgaggagtcggaggacgaacccgagccggaggaagacgac
gacgaagagccgcaggccccgaaggagcccaaggagaagggtgcgttcgtcgtcagcgac
aacgatgaggacgacgaagcccttctggcgaatccgggcgtgaatccgaagcgccgcgtg
gtaaccacgggcgcgaccgccgacccggtgaaggattatctcaagcagatcggtcgtgtg
agccttctcaatgccgaacaggaggtcgacctctccgagcgtatcgaggccggcctgtac
gcccagcatctgctcgacaccgagggcgacacgatggagttcagacgcaaacgcgaactc
aagtgggcagccgccgacggcaagaaggcgaaggaccacctgctcgaggccaatctgcga
ctcgtcgtctcgcttgccaagcgttacaccggccgcggcatgctattcctcgaccttatc
caggaaggcaatctgggtctcattcgcgccgtcgagaaattcgattggaagaaaggcttc
aagttctccacctatgccacctggtggatccgtcaggcgatcacccgcgccatggccgac
caggcccgcacgattcgtgtgccggtgcatatggtcgaggtgatcaacaaactctcgcgc
gtccagcgccagatgctgcaggatctgggccgtgagcccacgcccgacgagcttgcccgc
gagctcgacatgccggtggagaaggtgcaggaagtgcagaagtacggccgcgagccgatt
tcgttgcatacgccgctgggtgaggacggcgattccgaattcggcgatctgatcgaagac
accgatgccatcgcgccatcggaggcggtcgcattctcactgctacaggagcaattccgt
caggtgcttgaaacgctctcgccgcgtgaggcgggcgtgatcaagatgcgctatggtctc
gaggacggccagccgaagacgctcgacgacatcggccgcgtatatggcgtgacccgcgag
cgcattcgccagattgagtcgaagaccatgtcgaagttgcgtcatccgtcccgttcgcag
acgctgcgcgacttcctcgatcagtga
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