Bacillus amyloliquefaciens DSM 7: BAMF_3848
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Entry
BAMF_3848 CDS
T01321
Symbol
rocR
Name
(GenBank) transcriptional regulator (NtrC/NifA family)
KO
K06714
arginine utilization regulatory protein
Organism
bao
Bacillus amyloliquefaciens DSM 7
Brite
KEGG Orthology (KO) [BR:
bao00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bao03000
]
BAMF_3848 (rocR)
Transcription factors [BR:
bao03000
]
Prokaryotic type
Helix-turn-helix
Other families
BAMF_3848 (rocR)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
HTH_8
AAA_5
PAS_9
HTH_30
Mg_chelatase
AAA
PAS_4
AAA_3
HTH_50
PAS_10
AAA_16
PAS
AAA_2
AAA_7
MCM
HTH_28
AAA_19
DUF3929
LAGLIDADG_WhiA
PAS_7
Sushi_2
HTH_10
T4_Rnl1_C
Motif
Other DBs
NCBI-ProteinID:
CBI44974
UniProt:
A0A9P1JL22
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All DBs
Position
3909181..3910689
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AA seq
502 aa
AA seq
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MVSLPQFPFIFKNQQSAKFFCVSGSIYFKIMNVKTIGRGIDLHTTSEFFTLVLQSILEEI
DVGLHVVDEKGSTVIYNKKMMQIEDMDERDVLHKNLTDVFMFSNQQDSTLVQALQEGKTI
KNVKQSYFNNKGQEITTINHTFPIVQNGEIKGAVEIAKDVTKLERLIRENMHRKEQNSYT
FDSILGNSPVIREVIENAKRATRTSSSVLLAGETGTGKELFAQSIHNGSQRSGAPFISQN
CAALPDSLVESILFGTKKGAFTGAIDQPGLFEQAQGGTLLLDEINSLNLSLQAKLLRALQ
EKKIRRIGSAQDKPIDVRIIATMNEDPITAISEERLRKDLYYRLSVVTLIIPPLRERKED
ILPLAEVFIQKNNHLFQMHVDSISDDVQQFFLEYDWPGNIRELEHMIEGAMNFMTDETTI
TAAHLPYQYRMKIKPADTDAKAAPNTQPGTDLKGKMENFEKYMIENILRKHRNNISKTAH
ELGISRQSLQYRLKKFGLERMK
NT seq
1509 nt
NT seq
+upstream
nt +downstream
nt
atggtttctttacctcaatttccatttatttttaaaaatcagcaaagcgcaaaatttttt
tgcgtttccggctcaatttattttaaaataatgaatgttaagacgattgggaggggaatt
gacctgcacacaaccagcgaatttttcacactcgtattacaaagcattctggaagagatt
gatgtcgggctgcatgtggtagacgaaaagggcagcaccgtcatttacaataagaaaatg
atgcagattgaagatatggatgaacgggacgtcctgcataaaaatctgactgatgtattt
atgttttccaatcagcaggacagcacgctcgttcaggcccttcaggaaggcaaaacgatt
aaaaatgtgaagcaaagctatttcaataacaaaggccaggaaatcacgacgatcaatcat
acctttccgattgtgcaaaacggggagatcaagggcgccgtggaaatcgccaaggacgtc
accaagctcgaacggctgatcagggagaacatgcacagaaaagaacagaacagctatacg
tttgacagcattctcggcaacagtccggtcatccgggaagtcatcgaaaacgcaaaacgg
gcaacccgcacgtcttcatccgtgcttttggcgggtgagacgggaacaggaaaagaactg
ttcgcccaaagcattcacaacggcagccagcgctcaggcgccccgttcatatcacaaaac
tgtgccgccttgccggacagtctggtcgaaagtattttattcggcacgaaaaaaggcgcc
tttaccggagccatagaccagcccggcttatttgagcaggcacagggcggcaccctgctg
ctggatgagatcaactctctcaatctcagcctgcaggccaaactgctccgcgcccttcag
gaaaagaaaatcaggcgcatcgggtcagctcaggacaaaccgattgacgtccgtattatc
gccacgatgaatgaagacccgatcaccgccatttcggaagagcggctgcgcaaagattta
tattaccgattaagcgttgtcacgctgatcattccgccgctccgggagcgcaaagaggac
attctgccgctggctgaagtatttatccagaaaaacaatcacctgttccaaatgcatgtc
gattcgatcagtgacgatgtgcagcaattcttcctggaatatgactggccgggcaacatc
cgtgagcttgaacatatgattgaaggcgccatgaactttatgacggatgaaacgacgatt
acggcggcccacctgccttatcaataccgcatgaaaatcaaaccggctgacacggatgcc
aaagccgctccaaacacccagcccggcaccgatttaaaaggtaaaatggagaattttgaa
aaatatatgatcgaaaacattctgcgaaaacaccgcaacaacatatccaaaacggcacac
gagctcggtatcagcagacagagcctgcaataccgcctgaaaaaattcgggctggagcgg
atgaaatga
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