Borreliella tanukii: QIA26_01655
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Entry
QIA26_01655 CDS
T09341
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
batn
Borreliella tanukii
Pathway
batn03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
batn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
QIA26_01655 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
batn03021
]
QIA26_01655 (rho)
03019 Messenger RNA biogenesis [BR:
batn03019
]
QIA26_01655 (rho)
Transcription machinery [BR:
batn03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
QIA26_01655 (rho)
Messenger RNA biogenesis [BR:
batn03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
QIA26_01655 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
NACHT
Spore_III_AA
AAA
AAA_22
DUF5091
DUF1269
OB_RNB
AAA_25
Motif
Other DBs
NCBI-ProteinID:
WKC82391
LinkDB
All DBs
Position
complement(234887..236434)
Genome browser
AA seq
515 aa
AA seq
DB search
MDKKNGEFDLESEIRRLDISKEFKIEDNLKKKVVKVVAKKDSASNATKSADLSSAKDANG
VVFPEFDYDISASGLENNIKTLEQSNIIKFFNGKDYLEIEKLYDKPITEVRKIVEGLGTN
HTIAVTMKKTELIFLLVKILSENNINVLFTGVLDVLSDGYGFLRTASNSYLSGGNDVYVS
PSQIRLFNLRTGDILYGQIRSPRDGERFFAMVKIKSINNQDPTFAQNRIPFDNLTPLYPN
IKLNLEYENCNISTRLINLFSPIGKGQRALIVSPPKAGKTTLLQKIANAITTNYSDVILM
ILLIDERPEEVTDMIRSVKGEVIASNFDEQASRHVQVAEMVIEKAKRLVENKKDVVILLD
SITRLARAYNQTMPTSGKILSGGVDSNALHKPKRFFGSARNIEEGGSLTIIATALVDTGS
KMDEVIFEEFKSTGNMELILDRSLADRRLFPAINIKKSGTRKEELLLSEEERSKILLIRR
ILGGVDDYEGVEVLIEKMKKSKNNEIFLKTMSNGS
NT seq
1548 nt
NT seq
+upstream
nt +downstream
nt
atggataaaaaaaatggtgaatttgatttagaaagtgaaataaggcggttggatatttct
aaagagtttaaaattgaagataatttgaaaaaaaaagtggttaaagttgttgccaaaaag
gattctgcatctaacgcaacaaaatctgcagatttaagtagcgcaaaggatgcaaatggc
gtagtgtttcccgaatttgattatgatatttctgcttcaggtttagaaaataatattaaa
actttagagcaaagtaatatcattaagttttttaatggcaaagattatttagagattgaa
aaactttatgacaagccaattacagaggttagaaaaattgttgaaggtcttggaaccaat
catactattgctgtaacaatgaaaaaaaccgaattaatatttttgttggtaaaaatatta
agtgaaaataatattaatgttttatttacaggcgtgcttgatgtgcttagtgatggctat
gggtttttgagaaccgcatcaaattcttatctttcaggaggcaatgatgtttacgtttct
ccttctcagattagactttttaatttaaggacaggtgatattttatatgggcaaattaga
tcgcctagagatggtgagaggttttttgccatggttaaaattaaatctattaataatcaa
gatcctacatttgctcaaaacagaataccttttgataatttaactcctctttatcctaat
attaaattgaatcttgaatatgaaaattgcaatatttctacaaggcttattaatcttttt
tcacctataggtaagggacaaagggctttaatagtgtctcctccaaaagcgggaaagacc
actttgcttcaaaaaatagctaatgcaataactactaattattcggatgttattttgatg
atattgcttattgatgagagaccagaagaagttacagatatgattcgcagtgttaaaggt
gaagtgattgcgtctaattttgatgaacaagctagtaggcatgttcaggtagcagagatg
gttattgaaaaggcaaaaaggcttgttgaaaacaaaaaagatgttgttattttgcttgat
tctattacaagacttgcaagagcatataatcaaactatgccaacttctggtaaaatttta
tctggcggggtagattctaatgctcttcataagccaaagaggttttttggatctgctaga
aatattgaggaagggggaagtttaactattatagctactgctttggttgataccgggagt
aaaatggatgaagttatttttgaagaatttaaaagtaccggtaatatggaattaattctt
gatagaagtttggcagacagaagacttttccctgctattaatattaaaaagtcgggtacc
agaaaagaagagttacttcttagcgaagaggagcgttctaagattttgcttattagaaga
atactcggaggtgttgatgattatgagggagttgaagttctgatagaaaagatgaaaaaa
agcaaaaataatgagatttttttaaagacaatgagtaatggtagttaa
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