Bordetella avium: BAV1842
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Entry
BAV1842 CDS
T00695
Name
(GenBank) RNA polymerase sigma factor
KO
K03088
RNA polymerase sigma-70 factor, ECF subfamily
Organism
bav
Bordetella avium
Brite
KEGG Orthology (KO) [BR:
bav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bav03021
]
BAV1842
Transcription machinery [BR:
bav03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
BAV1842
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
Sigma70_ECF
GerE
HTH_23
HTH_Tnp_ISL3
HTH_40
HTH_28
HTH_24
Xre-like-HTH
HTH_36
HTH_29
EF-hand_9
Motif
Other DBs
NCBI-ProteinID:
CAJ49451
UniProt:
Q2L0R0
LinkDB
All DBs
Position
1933343..1933834
Genome browser
AA seq
163 aa
AA seq
DB search
MSNPLQAVCEDHYVWLCQWWRRRLDHADEAADLAHDTFLRVLRKPEEISCLRQPRAYLTP
IARGLLNDHWRRRSLERAWLEALAQLPPEYEIAPDMLLQMQQALQHLDDMLAALAPRARE
VFVLSQLEGLSYAKIAAQTGLNERTVKRYMAQSFEHCLTLVGG
NT seq
492 nt
NT seq
+upstream
nt +downstream
nt
atgtccaatccgcttcaggcagtttgtgaagatcactacgtttggctttgccagtggtgg
cgccgacgactcgaccacgccgacgaggctgcggatctggcgcacgacacttttttgcgg
gtattgcgcaaacccgaagagatatcctgcctgcgccagccgcgcgcttacctgaccccg
atcgcgcgcggcctgctcaacgaccattggcgccgccgctccctggagcgagcctggctg
gaagcgctggcccaactgccccccgagtacgagatcgcccccgacatgctcttgcagatg
cagcaggccctgcaacacctcgacgatatgctggccgcgctggccccacgcgcccgtgag
gtttttgtgctgtcgcagttggaggggctgtcctatgccaaaattgccgcgcagaccggc
ctgaacgagcgcaccgtcaaacgctatatggcccagagcttcgagcactgcctgacgctc
gtgggcggttga
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integrated database retrieval system
