Burkholderiales bacterium GJ-E10: E1O_20560
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Entry
E1O_20560 CDS
T03654
Name
(GenBank) integration host factor subunit beta
KO
K05788
integration host factor subunit beta
Organism
bbag
Burkholderiales bacterium GJ-E10
Brite
KEGG Orthology (KO) [BR:
bbag00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bbag03032
]
E1O_20560
03036 Chromosome and associated proteins [BR:
bbag03036
]
E1O_20560
03400 DNA repair and recombination proteins [BR:
bbag03400
]
E1O_20560
DNA replication proteins [BR:
bbag03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
E1O_20560
Chromosome and associated proteins [BR:
bbag03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
E1O_20560
DNA repair and recombination proteins [BR:
bbag03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
E1O_20560
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
TetR_C_30
BHD_2
Motif
Other DBs
NCBI-ProteinID:
BAP89187
UniProt:
A0A0A1H8Y7
LinkDB
All DBs
Position
complement(2187351..2187635)
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AA seq
94 aa
AA seq
DB search
MTKSELILRLSSRYPHLTARDADEAVTLILGALETALADGGRVEIRGFGSFSLNYRPERV
GRNPKSGEQVHVPAKYVPHFKAGKELRERVDGTV
NT seq
285 nt
NT seq
+upstream
nt +downstream
nt
atgaccaagtccgaattgatccttcgcctgtcttcccgctatccgcacctcacggcgcgc
gatgcggacgaggcggtgaccctgatcctgggcgcgctcgagacggcgctggccgacggc
gggcgggtcgagattcgcgggttcggcagcttttccctcaattaccgcccggagcgtgtc
gggcgcaatccgaagtcgggcgagcaggtgcacgtcccggcgaaatacgttccgcacttc
aaggctggcaaggagttgcgcgaacgggtcgatggcacggtttga
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