Bradyrhizobium barranii subsp. barranii: J4G43_004175
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Entry
J4G43_004175 CDS
T08665
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
bban
Bradyrhizobium barranii subsp. barranii
Pathway
bban03030
DNA replication
bban03410
Base excision repair
bban03420
Nucleotide excision repair
bban03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bban00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
J4G43_004175 (polA)
03410 Base excision repair
J4G43_004175 (polA)
03420 Nucleotide excision repair
J4G43_004175 (polA)
03440 Homologous recombination
J4G43_004175 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bban03032
]
J4G43_004175 (polA)
03400 DNA repair and recombination proteins [BR:
bban03400
]
J4G43_004175 (polA)
Enzymes [BR:
bban01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
J4G43_004175 (polA)
DNA replication proteins [BR:
bban03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
J4G43_004175 (polA)
DNA repair and recombination proteins [BR:
bban03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
J4G43_004175 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
J4G43_004175 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_pol_A_exo1
HHH_5
Transposase_20
Motif
Other DBs
NCBI-ProteinID:
UEM13529
UniProt:
A0A939M065
LinkDB
All DBs
Position
complement(851931..854984)
Genome browser
AA seq
1017 aa
AA seq
DB search
MPKSSPTTSPKTAAKADTKPAADKPAAKPVAAKVAGKGDHIFLVDGSGYIFRAYHALPPL
NRKSDGLQVNAVLGFCNMLWKLLRDMPADNRPTHLAIVFDKSEVTFRNKIYPEYKAHRPP
APDDLIPQFALIREAVRAFDLPCLEQGGFEADDLIATYARQASDRGAHTTIVSSDKDLMQ
LVNDKIMMYDTMKDRRIGIPEVIEKFGVPPEKVVEVQALAGDSTDNVPGVPGIGIKTAAQ
LIVEYGDLEQLLFRATEIKQPKRREALIENAEKARISRKLVLLDDKVELEVPLDDLAVHE
PDARKLIAFLKAMEFTTLTRRVADYSQIDPANVDADASNSSGARAGGDAARAKTSETSGD
LFAAPAATATGGDKSDKSAGLKGSPISLATAREEALRKLPVDRGKYQAIKTLKELNAFAA
RIHDTGHVAIETRANSIDPMQADLCGIALALAPNEACYVPLAHKQSGGGAGLFDAGLAPD
QVKHADAIEALRPVLESAGILKIGFDVKFTAVMLAQHGITLRNADDAQLISYVLDAGRGS
HAIEALAERWFGHAMLKESELLGSGKGKITFDQVPIDKAAPLSAEGADMALRVWRVLKPR
LVAEHMTAVYETLERPLVSVLARMERRGISIDRQVLSRLSGDFAQTAARVEAEIQEIAGE
PVNVGSPKQIGDILFGKMGLSGGTKTKTGAWSTTAQVLDELAEQGHDFPKKILEWRQVSK
LKSTYTDALPTYVNPQTHRVHTTYALAATTTGRLSSNEPNLQNIPVRTEDGRKIRRAFIA
TPGHKLVSADYSQIELRLLAEIADIPVLKQAFKDGLDIHAMTASEMFGVPIEGMPSEIRR
RAKAINFGIIYGISAFGLANQLGIAREEASAYIKKYFERFPGIRAYMDETRDFCRSNGYV
TTLFGRKMYYPDIKASNASVRAFNERAAINARLQGTAADIIRRAMTRMEDALAQKKLSAQ
MLLQVHDELIFEVPDAEVAATLPVVQHVMQDAPFPAVNLSVPLHVDARAAKNWDEAH
NT seq
3054 nt
NT seq
+upstream
nt +downstream
nt
atgcccaaaagctccccaacgacatccccgaagaccgccgccaaagccgacaccaaaccc
gctgctgacaagcctgctgccaaaccggtcgcggcgaaggtggccggcaagggcgaccac
atcttcctggtcgacggttccggctacatctttcgcgcctatcacgcgctgccgccgctg
aaccgcaagtccgacggcttgcaggtcaatgccgtgctcggcttctgcaacatgctgtgg
aagctgttgcgcgacatgcccgcggacaaccgcccgacgcatctggcgatcgtgttcgac
aagtcggaagtcacgttccgcaacaagatctatcccgagtacaaggcgcaccggccgccc
gcgcccgatgatctgatcccgcaattcgcgctgatccgcgaagccgtgcgcgccttcgat
ttgccctgcctggaacagggcggcttcgaggccgacgatttgatcgcgacctatgcgcgg
caggccagcgatcgcggcgcccacacgaccatcgtgtcctccgacaaggatctgatgcag
ctcgtgaacgacaagatcatgatgtacgacaccatgaaggatcgccgtatcggcattccc
gaggtgatcgagaagttcggcgtgccgccggagaaagtcgtcgaagtgcaggcgctggcc
ggcgattccaccgacaacgtgcccggtgtgcccggcatcggcatcaagaccgcggcgcag
ctgatcgtcgagtatggcgacctcgaacagcttctgttccgcgccaccgagatcaagcag
ccgaagcggcgcgaggcgctgatcgagaatgccgagaaggcgcggatctcgcgcaagctg
gtgctgcttgacgacaaggtcgaactcgaggtgccgctggacgacctcgcggtgcacgag
cccgacgcgcgcaagctgattgccttcctgaaggcgatggaattcaccacgctgacgcgc
cgcgtcgccgactattcgcagatcgatcccgccaatgtcgatgccgatgcgtcgaacagc
agcggcgccagggccggcggcgacgcggccagggcaaaaacgtcagagacctccggcgat
cttttcgccgctccagccgcgaccgcaacaggcggcgacaagagcgacaagtcggccggt
ctcaagggctcgccgatttcactggctaccgcgcgcgaagaggcgctgcgcaagctgccg
gtcgaccgcggcaaataccaggcgatcaagacgctcaaggagctcaacgccttcgccgcg
cgcatccatgacaccggtcatgtcgcgatcgagacgagagccaactccatcgatccgatg
caggccgatctgtgcggcatcgcgctggcgctggcgccgaacgaggcctgctacgtgccg
ctcgcgcacaagcagtccggtggcggcgccggtctgttcgacgcgggcctcgcgccggac
caggtcaagcatgccgacgcgatcgaagcactgcggccggtgctggaatcggcgggcatt
ctcaagatcggcttcgacgtcaagttcaccgccgtgatgctggcgcagcacggcatcacg
ctgcgcaacgccgacgatgcgcagctgatctcctatgtgctcgatgccggccgcggctcg
cacgcgatcgaagcgctcgcggagcgctggttcggccacgccatgctgaaggagagcgag
ttgctcggcagcggtaagggcaagatcaccttcgaccaggtgccgatcgacaaggccgca
ccgctgtcggcggaaggcgccgacatggccttgcgcgtgtggcgcgtgctgaagccgcgc
ctcgtcgccgagcacatgaccgccgtttacgagacgctggagcggccgctggtgtcggtg
ctcgcgcgcatggagcggcgcggcatctcgatcgaccgccaggtcttgtcgcggctatca
ggcgacttcgcccagaccgcggcgcgcgtcgaagccgagatccaggagatcgcgggcgag
cccgtcaatgtcggcagccccaagcagattggcgacatcctgttcggaaagatgggactg
tccggcggcaccaagaccaagactggcgcgtggtcgacgaccgcgcaggtgctcgacgag
cttgccgagcagggccacgacttcccgaagaagatcctggagtggcgccaggtttcgaaa
ctgaaatcgacctacaccgacgcgctgccgacctacgtcaacccgcaaacccatcgcgtc
cacaccacctacgcgctggccgcgaccacgacgggccggctgtcgtcgaacgagccgaat
ctgcagaatattccggtgcgcaccgaggacgggcgaaagatccgccgcgccttcatcgcg
acaccgggacataagctcgtctccgccgactattcgcagatcgagctgcggctgctcgcc
gagatcgccgacattcccgtcctcaagcaggcgttcaaggacgggctcgacattcacgcg
atgacggcctccgaaatgttcggcgtgccgatcgagggcatgccgagcgaaatccggcgc
cgcgccaaggcgatcaatttcggcatcatttacggcatctcggcattcggcctcgccaac
cagctcggcatcgcgcgcgaggaagcctccgcctacatcaagaagtatttcgagcgcttc
cccggtatccgcgcctacatggacgagacgcgcgacttctgccggagcaatggctatgtc
accacgctgttcggccggaagatgtactatcccgacatcaaagcttcgaacgcctcggtg
cgcgccttcaacgagcgcgccgcgatcaacgcgcggctccagggcaccgccgccgacatc
atccgccgcgccatgacgcggatggaggatgccctggcccagaagaagctgtcggcacag
atgctgctccaggtgcacgacgaactgatttttgaggtgcctgacgccgaggtcgcggcg
acgctgccggtggtgcagcacgtgatgcaggacgcgccgttcccggccgtgaacctgtcg
gtgccgctgcatgtcgatgcgcgcgcggcgaagaattgggacgaggcgcactga
DBGET
integrated database retrieval system
