Burkholderiales bacterium YL45: A4V04_08990
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Entry
A4V04_08990 CDS
T04607
Name
(GenBank) RNA polymerase sigma-54 factor
KO
K03092
RNA polymerase sigma-54 factor
Organism
bbay
Burkholderiales bacterium YL45
Pathway
bbay02020
Two-component system
bbay02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
bbay00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
A4V04_08990
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
A4V04_08990
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bbay03021
]
A4V04_08990
Transcription machinery [BR:
bbay03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
A4V04_08990
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
HTH_23
HTH_IclR
HTH_3
HTH_31
Sigma70_r4
HTH_38
DUF5838
ParB
Motif
Other DBs
NCBI-ProteinID:
ANU66534
LinkDB
All DBs
Position
2009993..2011354
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AA seq
453 aa
AA seq
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MLIGLSLKQTQKLALTPQLQQALKILQLPTQELIQEISTQLQENPFLTAEESSSEEQEAE
REDKGELLWESGFRTEVEEEDWDWEEAPQSLTSYLLEQLSCLKISLEESLRVQWIIGALD
SRGLLTESIEEIKDSFPAENNFSLEDWKSSLHLLQTFDPAGIGARDCLEVLSLQINTLLL
RKEIEKSTADLALRIIESYLEQVARRQVEKLKKTLDCNEQELEEALYVISHLDPRPTSRF
SNPEINFVLPEIKVEKVKGKWKPKLIRNAPKISLNRMYADAFSSTQTERDTKIWQGRLEE
ARQFIKSVEQRQTTLLNVSELIVNRQRDFFETGPEKLKPLVLREIADELGIHESTVSRIT
TGKYLICSRGTFELKYFFSSSHFAAGKSDEEVSASAIKAELKKIILGENPAKPLSDAKLS
QLLEQKGFTVARRTVAKYREALGLPPASLRKRC
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atgctgatcggtctatctttaaagcaaactcaaaaacttgctctaactccccagttacag
caggctttaaagattcttcagctgcctacgcaggaacttatccaggagatttccactcag
ctccaagaaaatccttttcttactgcagaagaaagttcctctgaggaacaagaagcagaa
agagaagacaaaggagagctgttatgggagtctgggtttcggaccgaggttgaagaggaa
gattgggattgggaagaggctcctcagtctctgacctcctatctgctggaacagctgtcc
tgcttaaaaatcagtcttgaggaaagtctgagagttcaatggattatcggcgccttagat
tcccgggggctgctgacagaaagcattgaagaaatcaaagactcttttccggcagagaac
aatttttcactcgaagattggaaaagttctctgcatcttcttcaaacctttgatcctgcc
ggtatcggagcaagagattgcctagaagtactttctcttcaaatcaacactcttctgctt
cgcaaagagattgaaaaaagcacagctgacttagctcttcgcatcattgaaagttatctt
gagcaggtcgcaagacgtcaggtagaaaagttgaagaagaccttagactgcaatgaacag
gagctcgaagaagctttgtatgtgatttcgcatcttgaccctcggcctacttctcgtttt
tccaaccctgagatcaattttgttctccccgaaatcaaagtagaaaaagtcaaagggaag
tggaaaccgaaactaattcgaaatgctccaaaaatttccctgaaccgaatgtatgcagat
gccttttccagcacgcaaactgaaagagataccaaaatttggcaagggcgtttagaagaa
gcccgtcaatttattaaaagcgttgagcagagacaaaccacattgctaaacgtttccgaa
ctcattgttaatcgacagagagatttctttgaaaccggcccggaaaaactcaaacctttg
gtgcttcgagaaatcgctgatgagttaggaattcatgaatcaaccgtctcccgtattaca
acagggaaatatttaatttgttcccgcggaacttttgaactgaaatactttttttcttca
tctcactttgccgcgggaaaatctgatgaagaagtttcggcttcggctattaaagcggag
ctaaaaaagataattctcggggaaaacccagccaagcccttgtctgatgccaaactctca
cagctcctagagcagaaaggttttacagtggcccgcagaaccgttgcgaaatatagagaa
gctctcggtttgccccctgcatcgctaagaaaacgatgctaa
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