Bifidobacterium animalis subsp. lactis BB-12: BIF_01536
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Entry
BIF_01536 CDS
T01840
Symbol
vsr
Name
(GenBank) DNA mismatch endonuclease Vsr
KO
K07458
DNA mismatch endonuclease, patch repair protein [EC:3.1.-.-]
Organism
bbb
Bifidobacterium animalis subsp. lactis BB-12
Brite
KEGG Orthology (KO) [BR:
bbb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bbb03400
]
BIF_01536 (vsr)
DNA repair and recombination proteins [BR:
bbb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Other MMR factors
BIF_01536 (vsr)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vsr
MTES_1575
RAP
Motif
Other DBs
NCBI-ProteinID:
ADC84686
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All DBs
Position
1505242..1505754
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AA seq
170 aa
AA seq
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MNKARKGAQWYARTIHCPGDTGGVAQSPSHPESPYARGTRSYTMSRIRGKDTSIEKTVRS
YLFARGFRFRKNDKRYPGHPDIVLPKYRTIVFVNGCFWHMHEGCESFHMPKSNVEFWAAK
LTRNRDRDRRQHEQLRQMGWRVIDVWECELRGDAREARLERLVGQIAEGV
NT seq
513 nt
NT seq
+upstream
nt +downstream
nt
gtgaacaaagcgcggaagggcgcgcaatggtatgcgcggacgatccactgcccgggcgat
actggtggcgtggcacaatccccctcgcacccagagtccccgtacgcgcgcggcacgcgc
agctacaccatgtcgcgcatccgcggcaaagacacgtcgatcgagaagacggtgcgctcc
tatctgttcgcgcgcgggttcagattccgcaaaaacgacaagcggtaccccgggcacccc
gacatcgtgctgcccaagtaccgcacaatcgtgtttgtgaacggctgtttctggcacatg
cacgaggggtgcgagtcgttccatatgccgaagtcgaatgtggagttctgggcggcgaag
ctcacgcgcaaccgagaccgcgaccgccggcagcacgagcagctgcggcagatgggatgg
cgcgtgatcgacgtgtgggaatgcgagctgcgcggcgacgcacgcgaagcgcggctcgag
cgacttgtggggcagattgcggaaggggtgtag
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