Bifidobacterium bifidum S17: BBIF_0670
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Entry
BBIF_0670 CDS
T01328
Symbol
ung
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
bbi
Bifidobacterium bifidum S17
Pathway
bbi03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
bbi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
BBIF_0670 (ung)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bbi03400
]
BBIF_0670 (ung)
Enzymes [BR:
bbi01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
BBIF_0670 (ung)
DNA repair and recombination proteins [BR:
bbi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
BBIF_0670 (ung)
Prokaryotic type
BBIF_0670 (ung)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
ADO52875
LinkDB
All DBs
Position
complement(820624..821415)
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AA seq
263 aa
AA seq
DB search
MHSFDTLATVEAMSQHPVKPLSQLVEPGWAAALQDVEPQVHHMGDFLRSELQAGRQYLPA
SHNILRAFTIPFDSIKVLIVGQDPYPTPGHPVGLSFCVAPDVRPLPKSLVNIYRELVDDM
HVPMPANGDLTPWTQRGVMLLNRCLTVGVGRPNSHQGKGWETITEAAIRALNARVDADGK
PKPLVAILWGRNAQSLAPLLTNATIIASPHPSPLSASRGFFGSHPFSRANQALVSMGAEP
VDWSLPSAQADRPDPHSAVASSR
NT seq
792 nt
NT seq
+upstream
nt +downstream
nt
atgcacagcttcgacacgctcgctacagtagaggccatgagtcaacatccagtcaaacca
ttgtcgcagctcgtggagcccggatgggccgccgcgctgcaggacgtggagccgcaggtc
catcacatgggcgatttcctccgctccgaactgcaggcaggacgtcagtacctgcccgca
agccataatatcctcagagccttcacaattccattcgactcgatcaaggtgctgatcgtc
gggcaggatccctacccgactccggggcatccggtcggcctgagcttctgtgtggcgccc
gacgtccgaccgctgccgaagagcctggtcaacatctaccgcgagctcgtcgacgacatg
cacgtgccgatgcccgccaacggtgacctgacaccctggacccagcgcggcgtgatgctg
ctgaacaggtgcctgaccgtcggcgtgggacgccccaacagccatcagggcaagggatgg
gagaccatcaccgaggccgccatccgcgcccttaacgcccgggtggacgcggacggcaag
ccgaagccgctggtggcgatcctctgggggcgcaacgcgcagagcctcgcgccactgctc
accaacgcgaccatcatcgcctcgccgcatcccagccctctgtccgcatcccgcgggttc
ttcggctcccacccgttctcccgcgccaaccaagcgctggtctccatgggcgccgaaccg
gtcgactggtcactgccatcggcgcaggcggatcggcccgatccccactccgcggttgct
tcgtcacggtaa
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