Bordetella bronchiseptica RB50: BB0192
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Entry
BB0192 CDS
T00141
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
bbr
Bordetella bronchiseptica RB50
Pathway
bbr00300
Lysine biosynthesis
bbr00470
D-Amino acid metabolism
bbr01100
Metabolic pathways
bbr01110
Biosynthesis of secondary metabolites
bbr01120
Microbial metabolism in diverse environments
bbr01230
Biosynthesis of amino acids
Module
bbr_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
bbr00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
BB0192 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
BB0192 (dapF)
Enzymes [BR:
bbr01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
BB0192 (dapF)
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Gene cluster
GFIT
Motif
Pfam:
DAP_epimerase
Motif
Other DBs
NCBI-ProteinID:
CAE30691
UniProt:
A0A0H3LGN5
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All DBs
Position
complement(198190..199101)
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AA seq
303 aa
AA seq
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MGDNPCMMWNFTKMHGAGNDFVVLDGVRQDIAMTPERARALADRHFGIGADQILLVEPAT
RADADFRYRIFNADGSEVEHCGNGARCFVRFVHEQGLSARNPLRAEIVTGVIVLDEGEDE
QVTVDMGSTRFDPPSLPFDSTGLSAQTQGQDTVWNLEIDAPAGLPRSVAISTVAISNPHA
VQVVDDVDAAPVGVIGPLVESHPRFARRVNVGFMQVVDRHQIRLRVYERGAGETLACGTG
ACAAVAAGVRRGLLDSPVRVHTRGGMLTVDWNGERLRMTGPAISVFSGQVDIDRLVFTSG
LHR
NT seq
912 nt
NT seq
+upstream
nt +downstream
nt
atgggtgataatccatgcatgatgtggaacttcaccaaaatgcacggcgcgggcaacgac
ttcgtcgtgctcgatggcgtccgtcaagacatagcgatgacgcccgagcgcgcccgcgcg
ctggccgaccgccatttcggcatcggcgccgaccagatcctgctggtcgaacccgccacg
cgggccgacgccgatttccgctaccgcattttcaacgccgacggcagcgaagtcgaacac
tgcggcaacggcgcgcgctgtttcgtgcgtttcgtgcacgaacaaggcctgtcggcgcgc
aatccgctgcgcgccgagatcgtgaccggcgtcatcgtgctggacgagggcgaagacgag
caggtcacggtcgacatgggcagcacccgcttcgacccgccgtccctgccgttcgactcc
accggcctgagcgcccagacgcagggccaggatacggtctggaacctggagatcgacgcg
ccggccggcctgccgcgcagcgtggcgatctcgaccgtggccatttccaacccgcacgcc
gtgcaggtggtcgacgatgtcgacgccgcgccggtcggtgtgatcggcccgctggtcgaa
tcgcacccgcgcttcgcgcgccgcgtcaacgtcggcttcatgcaggtcgtcgaccgccac
cagatccgtctgcgcgtctacgaacgcggcgccggcgaaacgctggcctgcggcaccggc
gcctgtgcggccgtcgccgcgggcgtgcggcgcggcctgctcgattcgccggtgcgcgta
cacacgcgcggcggcatgcttaccgtggactggaacggcgagcgcctgcgcatgaccggt
ccggccatttccgttttcagcggccaggtcgatatcgaccgcctggtgttcaccagcggc
ctgcaccgttag
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