Bordetella bronchiseptica RB50: BB3244
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Entry
BB3244 CDS
T00141
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
bbr
Bordetella bronchiseptica RB50
Brite
KEGG Orthology (KO) [BR:
bbr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bbr03016
]
BB3244 (truB)
Enzymes [BR:
bbr01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
BB3244 (truB)
Transfer RNA biogenesis [BR:
bbr03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
BB3244 (truB)
Prokaryotic type
BB3244 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
CAE33736
UniProt:
P65853
LinkDB
All DBs
Position
complement(3471897..3472631)
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AA seq
244 aa
AA seq
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MAKRRGLALDGVLLLDKPVGLSSNHALQRAKRTVDAAKAGHTGTLDPFATGLLVCCMGRA
TKISGRMLEADKTYQATLQFGEETDSGDLTGHIVARAPDGFAGVEEAALRDVLSRFVGTI
EQIPPMYSALKRDGKPLYEYARAGIELDRPPRQVTIRHIELLSFSGMQAQIDVACSKGTY
IRTLAQDIGRALGCHAHLAALRRTHVGPFSLDRAVTLEALQAMPDAKQALLAMNELPAGL
LPAT
NT seq
735 nt
NT seq
+upstream
nt +downstream
nt
atggctaaacgacgcgggctcgcgctcgacggtgtgctgttgctggacaaacccgtgggt
ttgtccagcaaccacgccttgcagcgagccaagcgcaccgtggacgcggccaaggccggt
catacgggaacgctggaccctttcgccaccggcctgctggtttgctgcatgggccgggct
accaagatctcgggccgcatgctcgaggccgacaagacctaccaggccacgctgcagttt
ggcgaggagaccgactcgggcgacctgaccggccacatcgtggcccgggccccggacgga
tttgccggtgtcgaagaggcggcgctgcgcgatgtgctgtcacgtttcgtgggcacgatc
gagcagatcccgcccatgtattcggcgctcaagcgcgacggcaagccgctttacgagtac
gcccgggcgggcatcgagctggaccgtccgcccaggcaggtgaccatccgccacatcgag
ctgctgtcgttctccgggatgcaggcgcagatcgatgtggcctgcagcaagggcacctat
atacgcacgctggcccaggacatcggccgcgcgctgggctgccatgcccacctggcggcg
ctgcggcgcacgcacgtcgggccgttttcgctggaccgcgccgtaaccctggaagccctg
caggcgatgcccgacgccaagcaggccttgcttgccatgaatgaattgccggcgggcctg
ctgcccgccacctga
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