Bifidobacterium breve 12L: B12L_0340
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Entry
B12L_0340 CDS
T03118
Name
(GenBank) Ribonuclease PH
KO
K00989
ribonuclease PH [EC:
2.7.7.56
]
Organism
bbre
Bifidobacterium breve 12L
Brite
KEGG Orthology (KO) [BR:
bbre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bbre03016
]
B12L_0340
Enzymes [BR:
bbre01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.56 tRNA nucleotidyltransferase
B12L_0340
Transfer RNA biogenesis [BR:
bbre03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
B12L_0340
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-ProteinID:
AHJ15134
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All DBs
Position
426593..427369
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AA seq
258 aa
AA seq
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MLGRMVEIKDMLGDCQIIRADGRKVDELRPVRITRHFTDAPEGSVLIECGNTRVMCTATF
TPGVPRWRKDSGLGWVTAEYAMLPRATSERTDRESVRGKIGGRTHEISRLIGRCLRGVID
MKALGENQIQLDCDVLQADGGTRTASVTGAYVALVDAVNWAEKHHHIKSADKVLKDYVSA
VSVGVINGTPMLDLPYIEDSQAMTDMNVAMTGSGTFIEIQGTAEHRPFNRAELGTLLDLA
EKGNKELQAAQRAALALD
NT seq
777 nt
NT seq
+upstream
nt +downstream
nt
atgctggggcgcatggttgaaatcaaagatatgctaggcgattgccagattattcgtgcc
gacggccgcaaggttgatgaactgcgtcctgtgcgcattacccgtcactttaccgatgcc
cctgaggggtcggtgcttattgaatgcggcaacacccgcgtgatgtgcaccgccactttt
acgccgggggtgccccgctggcgcaaggattccggccttggctgggtcactgccgaatac
gcgatgctgccgcgtgccacttccgagcgcactgatcgtgaatctgtgcgtggcaagatt
ggcggtcgcactcatgagatcagccgtctgattggtcgctgcctgcgtggcgtcatcgat
atgaaggcactgggtgagaatcagattcagcttgattgcgatgtgctgcaggccgatggc
ggcacccgtaccgcctctgtgaccggtgcatatgtggcgctggtcgatgcggtcaactgg
gcggagaagcaccaccatatcaaatctgcagacaaggtgttgaaggactatgtctccgcc
gtgtctgtaggcgtgattaacggcacgccgatgctggatttgccgtatatcgaagacagc
caggccatgaccgatatgaacgtggccatgaccggctcgggcaccttcatcgaaatccag
ggcactgccgaacatcgcccgttcaaccgtgccgaacttggcaccctgcttgatttggcc
gaaaaaggcaacaaggaactgcaagcagcccagcgtgccgcattggcactggactga
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