Bifidobacterium breve JCM 7017: B7017_0005
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Entry
B7017_0005 CDS
T03120
Name
(GenBank) DNA gyrase subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
bbrj
Bifidobacterium breve JCM 7017
Brite
KEGG Orthology (KO) [BR:
bbrj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bbrj03032
]
B7017_0005
03400 DNA repair and recombination proteins [BR:
bbrj03400
]
B7017_0005
Enzymes [BR:
bbrj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
B7017_0005
DNA replication proteins [BR:
bbrj03032
]
Prokaryotic type
DNA Topoisomerases
B7017_0005
DNA repair and recombination proteins [BR:
bbrj03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
B7017_0005
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
HATPase_c
Toprim
HATPase_c_3
Motif
Other DBs
NCBI-ProteinID:
AHJ16582
LinkDB
All DBs
Position
5000..7090
Genome browser
AA seq
696 aa
AA seq
DB search
MAEETSKEEQLKAAAERINNAELTEGELDESMAPEHYEASDLRVLEGLEAVRIRPGMYIG
STGPRGLHHLVYEIVDNSVDEALAGYASHIEVTILPDNGIRVVDDGRGIPVDEVPGEGVS
GVETVMTKLHAGGKFGGGGYAVSGGLHGVGISVVNALSTHVDIEVRRQGFHWTQTYVDQH
PVAPLKQGEPMAEDESTGTSVTFWADPKIFETTIYDFETLRSRFQQMAFLNKGLKLSLTD
ERVTDQAGDEVAGDAEGEPGEKHQTVTYQYLNGIKDYVDYLVKVRKATPVEEDVISFEAE
DLKLGISAELAMQWTTAYSEAVHTFANTISTTEGGTHEEGFRAALTSLVNRYARDKAILK
DKDENLSGDDVREGLTAVISVKLTNPQFEGQTKTKLGNSEAKTFVQRVMTDKLGDWFDAH
PAEAKNIIQKAIEASRARLAAKKARENTRRKSIFESAGMPDKLKDCQSSNPEECELFIVE
GDSAGGSAIQGRNPITQAILPLRGKILNTERASLDRMMKSDTIESLITAVGGGYGEDFDI
SKVRYHKVIIMADADVDGAHIATLNLTLFFRYMRPMITAGYVYVAMPPLYRLKWTKGPHD
FVYTDAERDRVLAEGKANGRQLPKGEGIQRYKGLGEMSYQELWETTMDPEHRILKQVHIE
DAAAADETFSMLMGDEVEPRRLFIQRNAKNVRWIDA
NT seq
2091 nt
NT seq
+upstream
nt +downstream
nt
ttggcagaagaaaccagcaaagaggagcagctgaaggcggctgcggaacgcatcaacaat
gcggaattgaccgaaggcgagcttgacgaatccatggctcccgagcattatgaggcctct
gaccttcgagtgcttgaaggtcttgaagccgtgcgtatccgtccaggtatgtacatcggc
tccaccggtccgcgtggtttgcaccacttggtctacgaaatcgtcgataactcggtcgat
gaggcgctggctggatatgccagccatattgaagtcactatcctgccggacaacggtatc
cgcgtggtggacgatggccgaggcattccggttgatgaggttcctggcgaaggcgtctcc
ggtgttgaaaccgtgatgaccaagctgcacgccggcggcaagtttggtggcggcggctac
gcggtgtccggcggtctgcacggcgtgggcatctccgtggtgaacgccctgtccactcac
gtggacatcgaagtgcgccgtcagggcttccactggacccagacttatgtcgaccaacat
ccggttgcgccgctgaaacagggcgagccgatggccgaggacgaatccaccggtacatcc
gtgaccttctgggccgacccgaagatctttgaaaccaccatctatgatttcgagacgttg
cgttcccgcttccaacagatggccttcctgaacaagggcctgaagcttagcctgaccgac
gaacgcgtcactgaccaggccggcgacgaagtggccggcgacgccgaaggcgagcccggt
gagaagcaccaaaccgtcacctaccagtacctcaacggcatcaaggattacgtcgactac
ctggtcaaggtgcgcaaggccacaccggtggaagaggatgtcatcagcttcgaggccgaa
gacctcaagctcggcatttccgctgaactcgccatgcagtggactaccgcctactccgag
gctgtgcacacctttgcgaacacgatttccaccactgaaggtggcacccacgaggagggc
ttccgtgcggcactgacctcgctggtcaaccgttacgcgcgtgacaaggccatcctcaaa
gacaaggacgagaacctgtccggcgacgacgtgcgtgaaggcctgacggccgtgatctcc
gtcaaactcaccaacccgcagttcgaaggccagaccaagaccaagctcggcaactccgaa
gccaagacctttgtgcagcgcgtgatgaccgacaagctcggcgactggttcgacgcccac
cctgccgaggccaagaacatcattcagaaggccatcgaagcctcccgcgcccgtctggcc
gccaagaaggcccgcgaaaacacccgccgcaagtccatcttcgagtccgccggcatgccc
gacaagctcaaggactgccagtcctccaacccggaagagtgcgagctgttcatcgtggag
ggtgattccgcaggcggttccgccattcagggccgcaacccgatcacacaggccatcctt
ccgctgcgaggcaagatcctcaacaccgaacgtgccagcctggaccgtatgatgaagtcc
gacaccatcgaatcgctgatcaccgcggtcggtggtggctacggcgaagacttcgacatc
tccaaggtgcgctatcacaaggtcatcatcatggccgatgccgatgtggacggtgcgcat
atcgccaccctgaacctgacgctgttcttccgctacatgcgtccgatgatcaccgccggt
tacgtgtacgtggccatgccgccgctgtaccgcttgaagtggaccaagggtccgcacgac
ttcgtgtacaccgacgctgagcgtgaccgtgtgcttgccgaaggcaaggccaacggtcgc
cagctgcccaagggcgaaggcattcagcgctacaagggtctgggcgagatgagctatcag
gagctgtgggaaaccaccatggatcccgaacaccgcattctgaagcaggtacacatcgag
gatgcggccgcagccgacgagaccttctcgatgctgatgggcgacgaagtggagccgcgc
cgcctcttcatccagcgcaacgccaagaacgtgcgttggatcgacgcgtaa
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