Bifidobacterium breve NCFB 2258: B2258_0648
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Entry
B2258_0648 CDS
T03122
Name
(GenBank) Phenylalanyl-tRNA synthetase beta chain
KO
K01890
phenylalanyl-tRNA synthetase beta chain [EC:
6.1.1.20
]
Organism
bbrn
Bifidobacterium breve NCFB 2258
Pathway
bbrn00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
bbrn00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
B2258_0648
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
bbrn01007
]
B2258_0648
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bbrn03016
]
B2258_0648
Enzymes [BR:
bbrn01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.20 phenylalanine---tRNA ligase
B2258_0648
Amino acid related enzymes [BR:
bbrn01007
]
Aminoacyl-tRNA synthetase
Class II (U)
B2258_0648
Transfer RNA biogenesis [BR:
bbrn03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
B2258_0648
Prokaryotic type
B2258_0648
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B3_4
tRNA_synthFbeta
FDX-ACB
B5
tRNA_bind
DUF2786
Motif
Other DBs
NCBI-ProteinID:
AHJ20862
LinkDB
All DBs
Position
806461..809070
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AA seq
869 aa
AA seq
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MPMIDIDWLKDHVEVPEGLTYEQLAKDLVKVGLEEEEIHSSQVTGPIVVGYVVDATPEPQ
KNGKVINWCHVDCGDEWNETDENGNKVPRGIICGAPNMKAGEKVVVTLPGAVLPGDFKIE
PRKTYGHISNGMCASERELGLGDNHNGIILLREYGFSEAEYEALKPGQDAMHLLHLDQPL
LEINITPDRGYTLSYRGVAREYHHSTGAAYTDPAIALNEKAPEPADYQPGTPVDIDIEID
DNNPIHGVPGCDRYYARVVKGFDPNAHTPSWMRRRLIRAGMRSISLAVDVTNYVMLDLGQ
PMHAYDLDKLEGPIVVRRANEGEKLTTLDGKEHDLSTEDLLITDSPNGERGSRILGLAGV
MGGLYGEVTADTKNILLEAAHFDQVTIARSARRHKIPSEASRRFERGVDTELQPAAAQMA
AELMAKYGNGEPSEHPNDVDNTPRPKVIHFKASEVARVAGLDVDINRISDILTDIGCVVA
GGGNGEFSVTAPSWRPDLGEPCDLVEEIARLVGYDQIPVTVPPAPVEGLVGLTPDQTRRR
RVADELAEYGMVEALSYPFVGDDDYRAFGFDPEATKKVSVEIANPLYGDRPYLRRDILPT
LATTVQRNIRRGIENVSLYELGHVYLWDPNAPAIPALPGGVRPTDEQLAALDAGLPDQPD
HVAGILTGLAEDDGWLGGKRPVDWSDAVEAVHRLADRIGAKIVLDQPAAEDVPAQWHPGR
AARVMVGDVFTGWVGELHPRVNEALGFPAHSAAFELNLTALFGTLTGKPVQAKPISSFPP
VKQDLAFTVDASVTADQLEAVIREAAGANLESIELFDVFTGEQVGEGKKSLAYAVVFRSP
DKTLSADDSDAIRQAIVAKAADLGAQLRA
NT seq
2610 nt
NT seq
+upstream
nt +downstream
nt
atgcctatgatcgacatcgattggctcaaggaccacgtcgaggtccccgaaggcctgacc
tatgaacagcttgccaaggacctcgtcaaggtgggccttgaagaagaggagattcactcc
tcccaggtgaccggcccgatcgtggtcggctacgtggtggacgccactcccgaaccgcag
aagaatggcaaggtcatcaactggtgccacgtggactgtggcgacgaatggaacgagacc
gacgagaacggcaacaaggtgccgcgcggcatcatctgcggcgcacccaatatgaaggcc
ggcgagaaggtcgtcgtcaccctgcctggcgccgtgctgcccggcgacttcaagattgag
ccgcgcaagacctacggccatatctctaacggcatgtgcgcatccgagcgtgaactgggt
cttggcgacaaccacaacggcatcatcctgctacgtgagtacggcttctctgaggccgaa
tacgaagctctgaaacccggccaggacgccatgcacctgctacatctcgaccagccgctg
ctcgagatcaacatcaccccggaccgtggctacacgctgtcttaccgtggcgttgcccgc
gagtaccatcactccaccggtgccgcctacaccgatccggccatcgcgctgaacgagaag
gctccggagcctgctgattaccagcccggcactccggtggacatcgacattgagattgat
gacaacaacccgattcatggcgttcccggttgcgatcgttactacgctcgcgtcgtcaag
ggcttcgaccccaacgcccacacgcccagctggatgcgtcgccgcctgattcgtgctggc
atgcgctccatctcgctggccgtggacgtgaccaactacgtgatgctcgatcttggtcag
ccgatgcacgcctacgacctcgataagctcgagggcccaatcgttgtgcgtcgtgccaac
gagggtgagaagctcaccacgctggacggcaaggaacatgacctgagcactgaagatttg
ctcatcactgattcgccgaatggcgaacgcggctcgcgtatcctcggccttgccggtgtg
atgggtggactgtacggcgaggtgaccgccgacactaagaacatcctgctggaggccgcg
cacttcgatcaggtgaccatcgcccgttccgctcgtcgccacaagattccgtctgaagca
tcccgtcgtttcgagcgtggcgtcgacaccgagctgcagcctgctgcggctcagatggcc
gccgagctcatggccaagtacggtaacggcgagcccagcgagcatccgaacgatgtggat
aacacgccgcgtccgaaagtcattcacttcaaggcttccgaagtggcccgtgtggccggt
ctcgatgtggacatcaaccgcatctccgacattctcaccgacatcggctgcgttgttgcc
ggcggcggcaacggcgaattctccgtcaccgcgccgagctggcgtccagatctgggtgaa
ccgtgtgatctggtcgaggaaatcgcccgactggtcggctacgaccagattccggtcacc
gtgccgcctgcaccggtcgagggccttgtgggcctgaccccggatcagactcgccgccgt
cgcgtggcggacgagctggccgaatacggcatggtcgaggcgctgagctacccgttcgtt
ggtgacgacgattaccgcgctttcggcttcgaccctgaagccaccaagaaggtcagcgtc
gagatcgccaacccgctctacggcgatcgcccgtacctgcgtcgtgacattctgccgacc
ttggccaccaccgtgcagcgcaatattcgccgaggcattgaaaacgtgtccctgtatgaa
ctcggccatgtctatctgtgggatccgaacgcgcccgcaatcccggctctgcccggtggc
gtgcgcccgaccgatgagcagctggcagcgctggacgccggtctgccggatcagcccgac
cacgtggccggcatcctgaccggtctggctgaagacgatggctggctgggcggcaagcgt
ccggtcgattggtcggacgccgttgaagccgtgcatcgtcttgcggatcgcatcggtgcg
aagatcgtgcttgatcagcctgcggccgaagatgtgcctgcacagtggcatccgggccgt
gctgcccgcgtcatggtgggcgacgtgttcaccggttgggtcggcgaactgcatccgcgc
gtcaacgaggcacttggcttcccggcgcattccgcggcgtttgagctgaaccttaccgcg
ctgttcggcaccctgaccggcaagccggtgcaggccaagccgatttccagcttcccgcca
gtcaagcaggatttggcctttaccgtggatgcgtcggtgactgccgatcagctggaagca
gtgattcgtgaggcggctggtgccaacctcgagtccatcgaattgttcgacgtgtttacc
ggcgagcaggtgggtgagggcaagaagtccctggcctacgctgtggtgttccgttccccg
gacaagaccttgtccgccgatgacagcgacgccattcgtcaggctatcgtggccaaggct
gccgatctcggtgcccagctgcgtgcctga
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