Brettanomyces bruxellensis: BRETT_000028
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Entry
BRETT_000028 CDS
T07183
Name
(RefSeq) uncharacterized protein
KO
K12662
U4/U6 small nuclear ribonucleoprotein PRP4
Organism
bbrx
Brettanomyces bruxellensis
Pathway
bbrx03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bbrx00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
BRETT_000028
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bbrx03041
]
BRETT_000028
Spliceosome [BR:
bbrx03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
BRETT_000028
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Gene cluster
GFIT
Motif
Pfam:
WD40
ANAPC4_WD40
NBCH_WD40
PRP4
Ge1_WD40
WDR54
Motif
Other DBs
NCBI-GeneID:
64571954
NCBI-ProteinID:
XP_041134801
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Position
3:75413..76729
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AA seq
438 aa
AA seq
DB search
MEEASNLTEIVPTIDDDVKFVLRRFQQPIIYFGEGPLERRQRLIEFFSKNKNSMESFLSS
QAELGKESIAPSKSEEQKDEEFYTPGPDVLFDVRVRIADSSLNRAKIRTDKQRELYQNFD
MITELKSRRSYYATLKTMEIEGSQVISNRFTSALKFSYSSAFIAAGSWDGHCYILDPHSL
DVKRTFMDVGDGKISTLDWMPHSNEIVATGGSEGNITLLNMSAVHMKKYPKFYGHTDRVT
SLQFIPIDSLIASASYDMTWRLWDVETQKSLYYQEGHSKELTSLSCHPDGSLLATAGLDA
IIRIWDIRTGKSIAALEKNGHIRAIHGLAWRPNGYQLISGGADNNLKVWDLRRADSAATN
TVLAHSKVITDIKISPDDKYITSCGYDGYLNLISSDNFSVIKKFKNVDKLMCCDISSDSK
TIITGGWDRSVKIYHTEL
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
atggaagaagctagtaatttgaccgaaatcgttcctacgatagatgacgatgtgaaattt
gtgttaaggcgtttccaacaacctatcatatactttggtgaaggtccgttggaacgaaga
cagcggctcatagagttcttttcaaagaataaaaactccatggaaagttttctttcttca
caagcagaactgggcaaagaaagcattgctccctctaagtcagaggagcagaaagatgaa
gaattttatacaccagggcctgatgtgctctttgatgtgagggtgcgaatagcggattcc
tcccttaacagagcaaaaattaggactgataagcagagagaattgtaccagaactttgat
atgattacagaacttaaatccagacggtcgtattatgcaaccttgaagacgatggaaatc
gaaggttctcaggttatctcgaaccgtttcacatcggccctaaaattctcgtatagtagt
gctttcattgcagcgggatcctgggatggtcattgttatatattagatccacattctttg
gatgttaaacggacatttatggatgtaggagacggtaaaatttccacgttggattggatg
ccgcactcaaatgaaatagttgccaccggtggatctgaaggtaatattacattacttaac
atgtcagcagtacatatgaagaaatatccaaaattttatggtcacacagatagagtgaca
tccctacagtttattcccatcgatagtcttattgctagtgcatcgtatgatatgacctgg
agactttgggatgtcgaaacacagaaatcattatattaccaggaaggacattccaaagaa
ctgacttcattgagctgtcatccagatggatcacttctcgccactgccggtcttgatgcg
atcattagaatttgggatataagaacaggaaaatcaatagcagctcttgagaaaaatgga
catattcgtgcaatccatggcttagcctggcgcccaaatggatatcaacttattagtgga
ggtgcagataataaccttaaagtgtgggatttgagaagagccgattcagctgccacaaac
acagtgttggctcattcaaaggtcataacagacattaaaatttcccccgatgataagtac
attacatcctgtggctatgatggatatctgaatttgatatcaagtgataacttttcagtt
attaaaaaattcaaaaatgttgacaaattaatgtgttgtgacatctcttctgatagtaaa
acaatcattactggcggctgggacaggtcggttaaaatttatcacacggaactctaa
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