Brettanomyces bruxellensis: BRETT_003032
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Entry
BRETT_003032 CDS
T07183
Name
(RefSeq) uncharacterized protein
KO
K03143
transcription initiation factor TFIIH subunit 3
Organism
bbrx
Brettanomyces bruxellensis
Pathway
bbrx03022
Basal transcription factors
bbrx03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
bbrx00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
BRETT_003032
09124 Replication and repair
03420 Nucleotide excision repair
BRETT_003032
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bbrx03021
]
BRETT_003032
03400 DNA repair and recombination proteins [BR:
bbrx03400
]
BRETT_003032
Transcription machinery [BR:
bbrx03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
BRETT_003032
DNA repair and recombination proteins [BR:
bbrx03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
BRETT_003032
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tfb4
Motif
Other DBs
NCBI-GeneID:
64574956
NCBI-ProteinID:
XP_041139339
LinkDB
All DBs
Position
9:2801443..2802471
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AA seq
342 aa
AA seq
DB search
MDSNNLRFKDVTSALLVMLNSHMALNSGNKVSLYIANSFYHGAKLVFPSFDDDDNDDSQS
PNSKEKVDDNSSLEEEKVNEIVKKKRSRQRKVNASRILETTGIYRQFRIIDETIVDSLDK
IIKNEPSNLKSLVGKGETHIKGTLSGALSQALSYINRFQNSDEHSGMKARIVCISVSGDN
TLPYVSIMNSIFAAQKQKVSVDVCKLGPNSTFLQQASDSTNGVYIYIKHPLGLIQYLSTA
LFIDPMLRPMVVLPTNTNIDFRASCFITNKVVDIGYVCSVCLCILSVIPEDEICPTCHSK
LDHDLIVMLKRKPRVLPLLKKAKRKRNSSTPDINPVKKFREN
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atggatagcaataacttgcggtttaaagatgtcacgagtgccttacttgtgatgttaaat
tctcacatggctctgaacagcggtaataaagtctcgttgtacatcgcaaatagtttttat
catggtgcaaagttagtctttccatcatttgatgatgatgataatgatgattctcaaagt
cctaatagtaaagagaaagttgatgataattcatctttagaagaagagaaggttaatgag
atagtaaagaaaaagcgatcaaggcaaagaaaagtgaatgctagccgaatcttagaaacc
actggaatttataggcaatttcgaattatagatgagactattgttgactctttagataag
attattaaaaatgaaccttcaaatctcaagtcactagtcgggaaaggtgaaacgcatatt
aaaggaactttatccggagcactttcacaagctttaagttatattaacaggtttcaaaat
tcagatgaacattctggtatgaaagcgcggatagtgtgcattagcgtaagtggagacaac
acattaccttatgtgtctataatgaactcaatttttgcagcacaaaagcagaaggtgtcc
gttgatgtttgtaagttaggtccaaattcaacttttctccagcaagcatcggattctaca
aatggggtatatatatatattaagcatccgcttggtttaattcagtatttatccaccgca
ttgtttattgatccgatgctaaggccaatggttgttctccccacaaatacaaatattgat
tttagagcatcttgctttataaccaacaaagtcgtggatattggttacgtctgctctgtt
tgcttatgcattttaagtgtaatacctgaggacgaaatttgtcccacatgtcactcaaag
ctagatcatgacctaattgttatgcttaagagaaagcctagagtattacccttactcaaa
aaggcaaaaagaaaaagaaactcttctactccggatataaacccggttaaaaaattcagg
gagaattaa
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