Borreliella bissettii: BbiDN127_0229
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Entry
BbiDN127_0229 CDS
T01593
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
bbs
Borreliella bissettii
Pathway
bbs03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bbs00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BbiDN127_0229 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bbs03021
]
BbiDN127_0229 (rho)
03019 Messenger RNA biogenesis [BR:
bbs03019
]
BbiDN127_0229 (rho)
Transcription machinery [BR:
bbs03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
BbiDN127_0229 (rho)
Messenger RNA biogenesis [BR:
bbs03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
BbiDN127_0229 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
ATPase_2
NACHT
AAA
Spore_III_AA
DUF5091
AAA_22
DUF1269
OB_RNB
AAA_25
AAA_18
Motif
Other DBs
NCBI-ProteinID:
AEL18414
UniProt:
G0AL38
LinkDB
All DBs
Position
complement(234306..235853)
Genome browser
AA seq
515 aa
AA seq
DB search
MDKKNGGFDLESEIRRFDVSKEFKIEDNLKKKVVKVVAKKDSASNLAKSADLSSAKDSNG
VVFPEFDYDIPSSGLENNFKTLEQSNIIKFFNGKDYVEIEKLYDKPITEVRKIVEGLGTN
HTIAVTMKKTELIFLLVKILSENNINVLFTGVLDVLSDGYGFLRTASNSYLSGGNDVYVS
PSQIRLFNLRTGDILYGQIRSPRDGERFFAMVKIKSINDQDPTFAQNRIPFDNLTPLYPN
MKLNLEYENCNISTRLINLFSPIGKGQRALIVSPPKAGKTTLLQKIANAITTNYSDVILM
ILLIDERPEEVTDMIRSVKGEVIASNFDEQASRHVQVAEMVIEKAKRLVENKKDVVILLD
SITRLARAYNQTMPTSGKILSGGVDSNALHKPKRFFGSARNIEEGGSLTIIATALVDTGS
KMDEVIFEEFKSTGNMELILDRSLADRRLFPAINIKKSGTRKEELLLSEEERSKILLIRR
ILGGVDDYEGVEVLIEKMKKSKNNEIFLKTMSNGN
NT seq
1548 nt
NT seq
+upstream
nt +downstream
nt
atggataaaaaaaatggtggatttgatttagaaagtgaaataaggcggtttgatgtttct
aaagagtttaagatagaagataatttgaaaaaaaaagtggttaaagttgttgctaaaaag
gattctgcatctaacttggcaaaatctgcagatttaagtagcgcaaaggattcaaacggt
gtagtatttcctgaatttgattatgatattccttcttcaggtttagaaaataattttaaa
actttagagcaaagtaatatcatcaagttttttaatggtaaagattatgtagagattgaa
aaactttatgataagccaattacagaggttagaaaaattgttgaaggtcttgggactaat
catactattgctgtaacaatgaaaaaaacagaattaatatttttattagtaaaaatatta
agcgagaataatattaatgttttatttacaggcgtgcttgatgtgcttagtgatggctat
gggtttttgagaacagcatcaaattcttatctttcaggaggcaatgatgtttacgtctct
ccttctcagattagactttttaatttaaggacaggcgatattttatatggccagattaga
tctcctagagatggtgagagattttttgcaatggttaaaattaaatctattaatgatcaa
gatcctacatttgctcaaaacagaataccttttgataatttaacccctctttatcctaat
atgaaattgaatcttgaatatgaaaattgcaatatttctacaaggcttattaatcttttt
tcgcctataggtaagggacaaagggctttaatagtttctcctccaaaagcgggaaagact
accttgcttcaaaaaatagctaatgcaataactactaattattcagatgttattttaatg
atattgcttattgacgagagaccagaagaagttacagatatgattcgtagcgttaaaggc
gaagtaattgcatctaattttgatgagcaggctagtaggcatgttcaggtagcagagatg
gttattgaaaaggcaaaaaggcttgttgaaaacaaaaaagacgttgttattttgcttgat
tctattacaaggcttgcaagggcatataatcaaactatgccaacttctggtaaaatttta
tcgggtggggtagattctaatgctcttcataagccaaagaggttttttggatctgctaga
aatatagaagaagggggaagtttgactattatagctaccgctttggttgataccggtagt
aaaatggatgaggttatttttgaagaatttaaaagtaccggcaatatggaattaattctt
gatagaagtttggcagacagaaggcttttccctgctattaatattaaaaagtcgggtacc
agaaaagaagaattacttcttagtgaagaggaacgttctaagattttgcttattagaaga
atactcggaggtgttgatgattacgagggagttgaagttctcatagaaaagatgaaaaaa
agcaaaaacaatgagatttttttaaagacaatgagcaatggtaattaa
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