Bubalus bubalis (water buffalo): 102389169
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Entry
102389169 CDS
T05912
Symbol
TRERF1
Name
(RefSeq) transcriptional-regulating factor 1 isoform X1
KO
K26583
transcriptional-regulating factor 1
Organism
bbub
Bubalus bubalis (water buffalo)
Brite
KEGG Orthology (KO) [BR:
bbub00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
bbub03036
]
102389169 (TRERF1)
Chromosome and associated proteins [BR:
bbub03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
MiDAC complex
102389169 (TRERF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2_6
ELM2
zf-C2H2_4
zf-C2H2
Myb_DNA-binding
zf-met
zf-C2H2_2
Myb_DNA-bind_7
Motif
Other DBs
NCBI-GeneID:
102389169
NCBI-ProteinID:
XP_044785889
EnsemblRapid:
ENSBBUG00015008649
LinkDB
All DBs
Position
2:35681584..35891598
Genome browser
AA seq
1221 aa
AA seq
DB search
MGDQQLYKTNHVAHGGENLFYQQPPLGVHGGLNHSYGNTVPGAGMDAPQASPISPHFPQD
TRDGLGLAVGSKNLGQVDTSRQGGWGGHAGPGNHVQLRGNLTNSNMMWGAPAQAEPTDGY
QYTYSQASEIRTQKLTSGVLHKLDSFTQVFANQNLRIQVNNMAQVLHTQSAVMDGAPDSA
LRQLLSQKPMEAPAAALPSRYQQASQQPHPGFTGGLSKPALQVGQHPSQGHLYYDYQQPL
AQMPVQGGQSLQAPQMLSQHMQQLQPHQYYPPQQQTHAGQQRVSMQEMQPPPQQQIRPPQ
PQPQPQPRQGSMQIPQYYQSPPMIQPLPEPQQPQMHLQPSSYHRDPHQYTPEQAHAVQLI
QLGSMPQYYYQEPQQPYGHPVYQQSHLPQHQQPEDSQPKTYPGDRQAQAMLSSHGDLGPP
DTGMGDAASSDLHRASSALPHRPLLSPGSIHLNNMGSQHQQLSPSAVWPQMHLPDGRAQP
VSPESSGQPKGVFGEQFDAKNKLTCSICLKEFKSLPALNGHMRSHGGMRASPSLKQEEGE
KAPAPPPQPQPPLPPPPPPPQLPPEAESLTPMVMPVSVPVKLLPPKPSSQGFANSVAAAP
SARDKPASSMSDDEMPVLVRMTLSPPHSPHGAAPNPPAEIPKKHQPGAAKAEEALRSAPA
EKKKFRHRPEPLFIPPPPSYTPNLAASHSGATLYQSQLRSPRVLGDHLLLDPAHELPPYT
PPPMLSPVRQGSGLFSNVLIAGHGPGAHPQLPLTPLTPTPRVLLCRSNSIDGSNLTVTPG
PGEQTVDVEPRINIGLRFQAEIPELQDVSALAQDTHRATLVWKPWPELENHDLQQRVENL
LNLCCSSALPGGGTNSEFALHSLFEAKGDVMAALEMLLLRKPVRLKCHPLANYHYAGSDK
WTSLERKLFNKALATYSKDFIFVQKMVKSKTVAQCVEYYYTWKKIMRLGRKHRTRLSEII
DDCVTSEEDEEVEEEEDPEEDRKSTREEESELPKSPEPPQGLVLAPAEGPPLQALGQPSG
SFICEMPNCGADCRCHVTPFLPQVFSSRQALNGHARIHGGTNQVTKARGTVPSGKQKPGS
AQSGYCSVKSSPSHSTTSGETDPTTIFPCKECGKVFFKIKSRNAHMKTHRQQEEQQRQKA
QKAAFAAEMAATIERTTGPVGPQGLLPLDQLSLIKPIKDVDLLDDDVVQQLGGVMAEAEV
VDTGLLLDDQASVLLQGDTEL
NT seq
3666 nt
NT seq
+upstream
nt +downstream
nt
atgggggaccagcagctatacaagaccaatcatgtggcccacggtggtgagaaccttttc
taccaacagccaccacttggcgtccacggcgggctgaaccacagctatgggaatacagtg
cccggggctggaatggatgcccctcaggcatcacccatctccccccacttccctcaagac
actcgggatggtctaggcttggctgttggctccaaaaaccttggccaagtggatacctcg
aggcagggagggtggggaggccacgcagggcctggaaaccatgtccagctacgtggaaac
ctgaccaattcgaacatgatgtggggggcgccggcccaggcggagcccaccgatggctac
cagtacacctactcgcaggccagcgagatccggacccagaagctcaccagcggtgtcctg
cacaagctagactctttcacccaggtgtttgccaaccaaaacctgcgaattcaggtcaac
aatatggcccaggtgctgcacacccagtcagcggtgatggacggagcgcctgacagcgcc
ctccgccagttgctgtcccagaagcccatggaggccccagcagcggctctcccgtcccgc
taccagcaggcgtcccagcagcctcaccctggtttcactggtgggctatccaaaccggct
ctccaggtcgggcagcacccaagccaagggcacctgtattacgactaccagcagccgctg
gcccaaatgccggtgcagggaggacagtcgctgcaggccccccagatgctatcccagcac
atgcagcagctgcagccgcatcagtattacccgccgcagcaacagacacacgccgggcaa
cagcgggtgtccatgcaagaaatgcagccgccgccacaacagcagattcgcccgccacag
ccccagccgcagccgcagccgcggcagggttcaatgcagatacctcagtattaccagtcc
ccacccatgatacagcctttgccagagccgcagcagccccagatgcacctgcagccctct
tcttatcacagggacccccatcaatacaccccagagcaggcgcacgcagtccagctgatt
cagctgggctccatgccccagtactactaccaggagccccagcagccctacggccacccc
gtgtaccagcagagccacctgcctcagcaccagcagcctgaggacagtcagcccaagact
tacccaggcgacaggcaggcccaggccatgctgagctcccacggggacctggggcctcca
gacacaggaatgggagacgcggccagctccgacctgcaccgggccagcagtgccctcccg
caccggccgctcctgtcccctggcagcatccacctcaacaacatggggtctcagcaccag
cagctgtctcccagtgccgtgtggccccagatgcacctacctgatggccgagcccagcca
gtgtctcctgagtcaagcggccaacccaaaggagtgtttggggagcagtttgatgccaag
aacaagctgacatgctccatctgcctgaaggagttcaagagcctgcccgccctgaatggc
cacatgcggtcccatggggggatgagggcctcccccagcctcaaacaggaggaaggagag
aaggccccggcgcctccgcctcagccccagccgccactgccgcctccgccgccgccacct
cagctccctcccgaggcggaaagcctcacgcctatggtcatgcccgtgtctgtccctgtc
aagcttctcccgcccaagcccagctctcagggcttcgccaacagcgtcgctgccgccccc
tcggccagagacaagccagccagctcgatgtcggacgacgagatgcccgtgctcgtgagg
atgaccctctctcccccacactcgccccatggggctgcccccaacccgcctgctgaaatt
cccaagaagcaccagccaggcgcggccaaagccgaggaagccctcaggagcgcgccagcg
gagaagaagaagttccggcaccggccggagccgctcttcatcccgccaccgccctcctac
acacccaacctcgctgcctcgcactccggcgccaccctgtaccagagccagctgcgctcc
ccacgggtgctgggcgaccacctgctcctggaccccgcccacgagctgcccccctacacg
cccccgcccatgctcagcccggtgcgccagggctcggggctcttcagcaacgtgctcatc
gccggccacggccccggcgcccacccgcagctgcccctcacgcccctgacgcccacgccg
cgcgtgctgctctgccgctccaacagcattgatggcagcaacctgacggtcaccccgggg
cctggagagcagaccgttgatgtcgaaccacgcatcaacattggcttgcgattccaagcg
gagatcccagaactccaggatgtctctgccctggcccaggacacacacagggccacacta
gtatggaagccctggccagagctggaaaaccacgacctccagcaaagagtggagaatctc
ctgaatttatgctgttcaagtgcgttgccaggtggagggaccaattctgaatttgctttg
cactctctcttcgaggccaaaggtgatgtgatggctgctctggaaatgctgctgttgcgg
aaaccagtcaggttaaaatgtcatcctttagcaaattaccactatgccggttcggacaag
tggacctctctagaaagaaaactgtttaataaagcactagccacttacagcaaagacttt
atttttgtacagaagatggtgaagtccaagacggtggctcagtgtgtggagtactattac
acgtggaaaaaaatcatgaggttggggaggaaacaccggacacggctctcagaaatcatc
gacgactgtgtgacgagtgaagaagatgaagaggtagaggaggaggaggatccggaagaa
gacaggaaatccacaagagaagaggagagtgaattgcccaagtccccggagccgccgcag
ggcctggtcctggctcccgcagaggggccgcccctgcaggccctgggccagccctcaggc
tccttcatctgtgaaatgcccaactgtggggcggactgtagatgtcatgtcactcccttt
cttccccaggtgttcagctcccggcaggcactgaacggccacgcccgcatccatggtggc
accaaccaggtgaccaaagctcggggcactgttccctctgggaagcagaagcctggcagt
gcccagagtgggtactgctcggtgaagagctcaccctcccacagcaccaccagcggcgag
acagaccccaccaccatcttcccctgcaaagagtgcggcaaagtcttcttcaagatcaaa
agccgaaatgcacacatgaaaactcacagacagcaggaggaacagcagaggcagaaagcg
cagaaggcggcgttcgcggccgagatggcagccacaatcgagaggactacggggccggtg
gggccgcaggggctgctgcccctggaccagctgagtctgatcaaacccatcaaggacgtg
gacctcctcgacgacgacgtcgtccagcagctaggaggcgtcatggcagaggccgaggtc
gtggacaccggtctcctcctggatgatcaggcttcagttttgcttcagggtgacacggaa
ctctaa
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integrated database retrieval system
