KEGG   Bubalus bubalis (water buffalo): 102395890
Entry
102395890         CDS       T05912                                 
Symbol
GRIN2C
Name
(RefSeq) glutamate receptor ionotropic, NMDA 2C
  KO
K05211  glutamate receptor ionotropic, NMDA 2C
Organism
bbub  Bubalus bubalis (water buffalo)
Pathway
bbub04020  Calcium signaling pathway
bbub04024  cAMP signaling pathway
bbub04080  Neuroactive ligand-receptor interaction
bbub04713  Circadian entrainment
bbub04720  Long-term potentiation
bbub04724  Glutamatergic synapse
bbub05010  Alzheimer disease
bbub05014  Amyotrophic lateral sclerosis
bbub05017  Spinocerebellar ataxia
bbub05020  Prion disease
bbub05022  Pathways of neurodegeneration - multiple diseases
bbub05030  Cocaine addiction
bbub05031  Amphetamine addiction
bbub05033  Nicotine addiction
bbub05034  Alcoholism
Brite
KEGG Orthology (KO) [BR:bbub00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04020 Calcium signaling pathway
    102395890 (GRIN2C)
   04024 cAMP signaling pathway
    102395890 (GRIN2C)
  09133 Signaling molecules and interaction
   04080 Neuroactive ligand-receptor interaction
    102395890 (GRIN2C)
 09150 Organismal Systems
  09156 Nervous system
   04724 Glutamatergic synapse
    102395890 (GRIN2C)
   04720 Long-term potentiation
    102395890 (GRIN2C)
  09159 Environmental adaptation
   04713 Circadian entrainment
    102395890 (GRIN2C)
 09160 Human Diseases
  09164 Neurodegenerative disease
   05010 Alzheimer disease
    102395890 (GRIN2C)
   05014 Amyotrophic lateral sclerosis
    102395890 (GRIN2C)
   05017 Spinocerebellar ataxia
    102395890 (GRIN2C)
   05020 Prion disease
    102395890 (GRIN2C)
   05022 Pathways of neurodegeneration - multiple diseases
    102395890 (GRIN2C)
  09165 Substance dependence
   05030 Cocaine addiction
    102395890 (GRIN2C)
   05031 Amphetamine addiction
    102395890 (GRIN2C)
   05033 Nicotine addiction
    102395890 (GRIN2C)
   05034 Alcoholism
    102395890 (GRIN2C)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04040 Ion channels [BR:bbub04040]
    102395890 (GRIN2C)
Ion channels [BR:bbub04040]
 Ligand-gated channels
  Glutamate (ionotropic)
   102395890 (GRIN2C)
SSDB
Motif
Pfam: Lig_chan Lig_chan-Glu_bd SBP_bac_3 ANF_receptor NMDAR2_C
Other DBs
NCBI-GeneID: 102395890
NCBI-ProteinID: XP_044794479
EnsemblRapid: ENSBBUG00015010023
LinkDB
Position
3:complement(6779942..6791369)
AA seq 1226 aa
MGVALGLALLLTSLLGAWAGLGPGQGEQTVTVAVVFGSSGSPQAQARTRLTPQSFLDLPL
EIQPLSVGVNNSNPSSLLTQICGLLGAARVHGIVFEDNVGTEAVAQILDFISSQTHVPIL
SISGGSAVVLTPKESGSAFLQLGVSLEQQLQVLFKVLEEYDWSAFAVITSLHPGHALFLE
GVRAITDASYLSWRLLDVLTLELGPGGARQHTQRLLRQLDAPVLVAYCSREEAEVLFAEA
AQAGLVGPGHVWLVPSLALGSTDTPPAAFPVGLISVVTESWRLSLRQKVRDGVAILALGA
HGYRRQHGALPAPAGDCRAHHGPLSPAREAFYRHLLNVTWEGRDFSFSPGGYLVQPTMVV
IALNRHRLWEMVGRWDHGVLHMKYPVWPRYSASLQPVVDSRHLTVATLEERPFVIVESPD
PGTGGCVPNTVPCRRQSNHTFSGDAAPYTKLCCKGFCIDILKKLARVVRFSYDLYLVTNG
KHGKRVRGVWNGMIGEVYYKRADMAIGSLTINEERSEIVDFSVPFVETGISVMVARSNGT
VSPSAFLEPYSPAVWVMMFVMCLTVVAITVFMFEYFSPVSYNQNLTSGKRSGGPSFTIGK
SVWLLWALVFNNSVPIENPRGTTSKIMVLVWAFFAVIFLASYTANLAAFMIQEQYIDTVS
GLSDKKFQRPQDQYPPFRFGTVPNGSTERNIRSNYRDMHTHMVKFNQRSVEDALTSLKMG
KLDAFIYDAAVLNYMAGKDEGCKLVTIGSGKVFATTGYGIAMQKDSHWKRAIDLALLQFL
GDGETQKLETVWLSGICQNEKNEVMSSKLDIDNMAGVFYMLLVAMGLALLVFAWEHLVYW
KLRHSVPNTSRLDFLLAFSRGIYSCFSGVQSLASPAHPPSPDLTAGSAHASVLKMLQAAR
DMVTTAGVSSSLDRATRTIESWGGGRPAPPPPACPGPRPPTPGPPREPSPTGWRPPGGGR
AALGRRAAQPSGRPPTPRPALPDVSREASRRAWEARWPLRPGRRGRRFSASERRALPERP
LSPERGHYSSFPRADRSGRPFLPLFPEPPEPEDLPLLGPEQLARREALLRAAWVRGSRPR
HASLPSSVAEAFTRPSSGPARCARPACGRLIPAQSMRLPSYREACQEGLWAGPPAWPHGQ
HACLHAHAHLPLCWGVVCSHLPPCAAHGPWLPGTWGLPGHRDRTLGLSPEYSNSGELEGV
SRAACGTHGFPRPCTWRRISSLESEV
NT seq 3681 nt   +upstreamnt  +downstreamnt
atgggggtggccctgggcctggccctgctgcttacctcactccttggggcctgggcaggg
ctgggccctgggcagggagagcagactgtgacggtggccgtggtgtttggcagctcgggg
tccccgcaggcccaggcccgtacccgcctcaccccccagagcttcctggacttgcccctg
gagatccagccgctgagtgtgggcgtcaacaactccaaccccagcagtctcctcacccag
atctgcgggctcctgggggctgcccgcgtccatggcatcgtctttgaggacaacgtgggc
actgaggccgtggcccagatcctggacttcatctcctcccagacccacgtgccaatcctc
agcatcagtgggggctctgctgtggtcctcacccccaaggagtcgggctccgccttcctg
cagctgggcgtgtccctggagcagcagctgcaggtgctgttcaaggtgctggaggagtat
gactggagcgccttcgccgtgatcaccagcctgcaccccggccacgctctcttcctcgag
ggcgtgcgcgccatcaccgacgccagctacctgagctggcggctgctggacgtgctcacg
ctggagctgggccccggaggggcgcgccagcacacccagcgcctactgcgccagctcgac
gccccggtgctggtggcctactgctcgcgcgaggaggccgaggtgctcttcgccgaggcg
gcgcaggctggcttggtggggcccgggcacgtgtggctggtgcccagcctggcgctgggc
agcaccgacacgccccctgccgccttccccgtgggcctcatcagcgtcgtcaccgagagc
tggcgcctcagcctgcgccagaaggtccgagacggcgtggctatcctggccctgggcgct
catggctaccggcgccagcacggtgcgctgcccgccccggctggggactgccgcgcccac
catgggcccctcagccctgcccgggaggccttctacaggcacctgctgaatgtcacctgg
gagggccgggacttttccttcagccctggtgggtacctggtccagcccaccatggtggtg
attgccctcaaccggcaccgcctttgggagatggtggggcgctgggaccacggcgtcctg
cacatgaagtaccccgtgtggcctcgctacagtgcctccctgcagcccgtggtggacagc
cggcacctgacggtggccacgctggaggagcgaccctttgtcatcgtggagagccccgac
cctggcacaggcggctgcgtgcccaacactgtgccctgccgccggcagagcaaccacacc
ttcagcggtgacgcggccccctacaccaagctttgctgtaagggcttctgcatcgacatc
ctcaagaagctggccagggtggtcaggttctcctacgacctgtacctggtgaccaacggc
aagcacggcaagagggtgcgcggtgtgtggaacggcatgatcggggaggtgtactacaag
cgggcggacatggccatcggctccctcaccatcaacgaggagcgctctgagattgtggat
ttctccgtgcccttcgtggagacgggcatcagcgtgatggtggcccgcagcaacggcacc
gtctccccctcggccttcctggagccctacagccctgccgtgtgggtcatgatgttcgtc
atgtgcctcacggtcgtggccatcactgtcttcatgttcgagtacttcagccccgtcagc
tacaaccagaacctcaccagcggcaagaggtctgggggcccgtccttcaccatcggcaag
tccgtgtggctgctctgggcgctggtcttcaacaactcggtgcccatcgagaacccccgg
ggcaccaccagcaagatcatggtgctggtgtgggccttcttcgccgtcatcttcctcgcc
agctacactgccaacctggccgccttcatgatccaggagcagtacatcgacaccgtgtct
ggactcagtgataagaagttccagcggccacaggatcagtacccgcccttccgctttggc
acggtgcccaacggcagcacggagcggaacatccgcagcaactaccgcgacatgcacacc
cacatggtcaagttcaaccagcgctcggtggaggatgcgctgaccagcctcaagatgggg
aagctggacgccttcatctatgacgccgctgtcctcaactacatggcgggcaaggacgag
ggctgcaagctggtcaccatcggctctggcaaggtctttgccaccactggctatggcatc
gcaatgcagaaggactcccactggaagcgggccatagacttggcgctcctacagttcctg
ggagatggggagacccagaagctggagacggtgtggctctctgggatctgccagaatgag
aagaacgaagtgatgagcagcaagctggacatcgacaacatggcgggcgtcttctacatg
ctgcttgtggccatggggctggccctgctggtctttgcctgggagcacctggtctactgg
aagctgcgccactccgtgcccaacacgtcccggctggacttcctgctggccttcagcagg
ggtatctacagctgcttcagcggcgtgcagagcctggccagccccgcgcacccgcccagc
cccgacctcacagccggctcggcccacgccagcgtgctcaagatgctgcaggcggcgcgc
gacatggtgaccacggcaggggtgagcagctccctggaccgcgccacgcgcaccatcgag
agctggggcggcggccgccctgcgcccccgccgcccgcctgccccggcccgcggccgccc
accccgggtcctccccgcgagccgagccccacgggctggaggccgccgggcgggggccgc
gccgcgctggggcgcagggccgcgcagccctcgggccgccccccgacgccccggcccgcc
ctccccgacgtctcccgggaggcgagccggcgggcctgggaggcgcggtggccgctgcgg
cccgggcgccgcgggcggcgcttttcggcctccgagcggcgtgcgctcccggagcgtccc
ctgtcgcccgagcgcggccactacagctccttccctcgcgccgaccggtccggacgcccc
ttcctgccgcttttcccggagcccccggagcccgaggacctgccgctgctcgggccggag
cagctggctcggcgggaggccctcctgcgcgcggcctgggtccgggggtcacgccctcgc
cacgcgtctctgcccagctcggtggccgaagccttcactcggccaagttctgggcccgct
cggtgtgcccgcccggcctgcgggcgcttgataccggcgcagtccatgcggctgccgtct
taccgcgaggcctgccaggaggggctgtgggccgggccccccgcctggccgcacggacag
cacgcctgcctccacgcccatgcccacctgccgctctgctggggagttgtctgctctcac
ctcccaccctgtgccgcccacggcccctggctccccgggacctgggggcttccggggcac
agggacaggaccctggggctgagcccagaatacagcaacagtggggaactggaaggggtc
agcagggcggcctgtgggacccacggctttccacggccttgcacctggaggcggatctcc
agcttggagtcagaagtgtga

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