Bubalus bubalis (water buffalo): 102395988 Help Entry 102395988         CDS       T05912                                  Symbol CDH23 Name (RefSeq) cadherin-23 isoform X1   KO K06813   cadherin 23 Organism bbub  Bubalus bubalis (water buffalo) Brite KEGG Orthology (KO) [BR:bbub00001]  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    03037 Cilium and associated proteins [BR:bbub03037]     102395988 (CDH23)    04515 Cell adhesion molecules [BR:bbub04515]     102395988 (CDH23) Cilium and associated proteins [BR:bbub03037]  Primary cilia and associated proteins   USH complex and associated proteins    102395988 (CDH23) Cell adhesion molecules [BR:bbub04515]  Cadherins   Major cadherins    102395988 (CDH23) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Cadherin Cadherin_3 Cadherin_2 Sde0182_C Motif Other DBs NCBI-GeneID:  102395988 NCBI-ProteinID:  XP_025140483 LinkDB All DBs Position 4:146677863..147114582 Genome browser AA seq 3354 aa AA seqDB search MRCHVASSCLAVWLSVLISGCWGQVNRLPFFTNHFFDTYLLISEDTPVGSSVTQLLARDM DNDPLVFGVSGEEASRFFAVEPDTGVVWLRQPLDRETKSEFTVEFSVSDHQGVITRKVNI QVGDVNDNAPTFHNQPYSVRIPENTPVGTPIFIVNATDPDLGAGGSVLYSFQPPSQFFAI DSARGIVTVIRELDYETTQAYQLTVNATDQDKTRPLSTLANLAIIITDVQDMDPIFINLP YSTNIYEHSPPGTTVRIITAIDQDKGRPRGIGYTIVSGNTNSIFALDYISGALTLNGLLD RENPLYSHGFILTVKGTELNDDRTPSDATVTTTFNILVIDINDNAPEFNSSEYSVAITEL AQVGFALPLFIQVVDKDENLGLNSMFEVYLVGNNSHHFIISPTSVQGKADIRIRVAIPLD YETVDRYDFDLFANESVPDHVGYAKVKITLINENDNRPIFSQPLYNVSLYENVTVGTSVL TVLATDNDVGTFGEVNYFFSDDPDRFSLDKDTGLIMLIARLDYELIQRFTLTVIARDGGG EETTGRVRINVLDVNDNMPTFQKDTYVGALRENEPSVTQLVRLRATDEDSPPNNQITYSI VNASAFSSYFDISVYEGYGVISVSRPLDYEQIPNGLIYLTVMAKDAGNPPLNNTVSVTIE VFDENDNPPTFSKPAYFVSVVENIMAGATVLFLNATDLDRSREYGQESIIYSLEGSSQFR INARSGEITTTSLLDRETKSEYILIVRAVDGGVGHNQKTGIATVNITLLDINDNHPTWKD APYYINLVEMTPPDSDVTTVVAVDPDVGENGTLVYSIQPPNKFYSLNSSTGKIRTTHVML DRENPDPHEAELMRRIIVSVTDCGTPPLKATSSATVFVNLLDLNDNDPTFQNLPFVAEVL EGTPAGVSVYQVAAIDLDEGLNGLVSYRMQVGMPRMDFVINSSSGVVVTTAELDRERIAE YQLRVVASDAGTPTKSSTSTLTIRVLDVNDETPTFFPAVYNVSVSEDVPREFRVVWLNCT DSDVGLNAELSYFITGGNVDGKFSVGYRDATVRTVVNLDRETTATYTLVLEAIDNGPVGK RRTGTATVFVTVLDVNDNRPIFLQSSYEASVSEDIPEGHSIVQLKATDADEGEFGRVWYR IVHGNHGNNFRIHISNGLLMRGPRPLDRERNSSHVLIVEAYNHDLGPMRSSVRVIVYVED VNDEAPVFTQQQYNRLGLRETAGIGTSVIVVRATDRDTGDGGLVNYRILSGAEGKFEIDE STGLIITVDYLDYETKTSYLMNVSATDQALPFNQGFCSVYITLLNELDEAVQFSNASYEA AILENLALGTEIVRVQAYSIDNLNQITYRFDAYTSAQAKALFKIDAITGVITVKGLVDRE KGDFYTLTVVADDGGPKVDSTVKVYITVLDENDNSPRFDFTSDSAISVPEDCSVGQRVAT VKARDPDAGSNGQVVFSLAAGNIAGAFEIVTTNDSIGEIFVARPLDREELDHYILKVVAS DRGTPPRKKDHILQVTILDINDNPPVIESPFGYNVSVNENVGGGTAVVQVRATDRDIGIN SVLSYYITGGNEDMTFRMDRVSGEIATRPAPPDRERQSFYHLVVTVEDEGTPTLSATTHV YVTIVDENDNAPVFQQPHYEILLDEGPDTINTSLITIQALDLDEGPNGTVTYAIVAGNII NTFRINRHTGIIRAAKELDYEISHGRYTLIVTAADQCPLLSHRLTSTTTVLVNVNDINDN VPTFPRDYEGPFDVTEGQPGPRVWTFLAHDQDSGPNGQVEYSIVDGDPLGEFLISPVEGV LRVRKDVELDREAIAFYNLTICARDRGVPPLSSTMLVGIRVLDINDNDPVLLNLPMNVTI SENSPVSSFVARILASDADSGCNALLTFNITAGNRERAFSINATTGIITVNRPLDRERIP EYRLTISVKDNPENPRIARRDFDLLLIFLADENDNHPVFTESTYLAEVMENSPAGTSLTV LNGPVLALDADLDVYAVVTYQLLGAQSGLFDIDNSTGVVTVRSGIVIDREAFSPPVLELL LLAEDIGLLNGTADLLVTILDDNDNQPTFSPAAVAVHLLENCPPGFSVLQITATDEDSGL NGELIYRIEAGAQDRFIIHPVSGIICVGNATIDREEQESYRLTVVATDRGSVPLSGTATV TVLIDDINDSRPEFLNPIQTVSVLESAEPGTVIANVTAIDRDLNPKLEYHIIDIVAKDDT DRLVPDQEDAFAVNINTGSVMVKSPLNRELVATYEVTLSVIDNASDLPERSVSVPNAKLT VNILDVNDNTPQFKPFGITYYTERILEGATPGTTLIAVAAVDPDKGLNGLITYSLLNLMP PGYVQLEDSSAGKVVANRTVDYEEVHGLNFTVRASDNGSPPRAAEIPVYLEIVDINDNNP IFDQLSYQEAVFEDVPVGTVILTVTATDADSGNFALIEYSLVDGEGKFAISPTTGDIYVL SSLDREKKDHYILTALAKDNPGDVASNRRENSVQVVIQVLDVNDCRPQFSKLQFSTSVYE NEPAGTSVITMMATDQDEGSNAELAYSLEGPGVEAFHVDMDSGLVTTKRPLQSYERFSLT VVATDGGQPPLWGTTMLLVEVIDVNDNRPVFVRPPNGTILHIREEIPLSSNVYEVYATDK DEGLNGAVRYSFLKTTGNRDWEYFTIDPISGLIQTAQRLDREKQAVYSLILVASDLGQPV PYETMQPLQVALEDIDDNEPLFMRPPKGSPQYQLLTVPEHSPRGTLVGNVTGAVDADEGS NAIVYYFIAAGNEEKNFQLQPDGRLLVLRDLDREREAIFSFIVKASSNRSWTPPRRPSPA LDLVTDLSLQEVRVVLEDINDQPPRFTKAEYTAGVATDAKVGSELIQVLALDADIGNNSL VFYSILAIHYFQALANDSEDVGQVFTMGSVDGILRTFDLFMAYSPGYFVVDIVARDLAGH NDTAVIGIYILRDDQRVKIVINEIPDRVRGFEEEFIRLLSNITGAIVNTDDVQFHVDKKG RVNFAQTELLIHVVNRDTNRILDVDRVIQMIDENKEQLRNLFRNYNVLDVQPAISVRPPD DMSALQMAIIVLAILLFLAAMLFILMNWYYRTVHKRKLKAIVAGSAGNRGFIDIMDMPNT NKYSFDGANPVWLDPFCRNLELAAQAEHEDDLPENLSEVADLWNSPTRTHGTFGREPAAV KPDDDQYLRAAIQEYDNIAKLGQIIREGPIKGSLLKVVLEDYLRLKKLFAQRMVQKASSS HSSISELIQTELEEEPGERSPGQGSLRFCHKPPTELRGPDGIHVIHGSTGTLLATDLNSL PEDDQKGLGRSLEMLTTAEASAFERNARTESAKSTPLHKLRDVIMESPLEITEL NT seq 10065 nt NT seq  +upstreamnt  +downstreamnt atgaggtgccacgtagcctccagctgcctcgcggtctggctttctgtgctgatctctgga tgctggggccaggtgaaccgactgcccttcttcaccaaccacttctttgacacatacctg ctgatcagtgaggatacgcctgtgggttcctctgtgacccagttgctggctcgagacatg gacaatgaccccctggtgtttggcgtgtctggggaggaggcctcccgcttctttgctgtg gagcctgacacaggcgtggtgtggctccggcagccactggacagagagaccaagtcagag ttcacagtggagttctctgtcagcgaccaccagggggtgattacaaggaaggtgaacatc caggtcggggacgtgaatgacaatgcacccacgtttcataatcagccctacagtgtccgc atccctgagaacacaccagtggggacacccattttcattgtgaacgccacggaccctgac ctgggcgcaggcggcagcgtcctctactccttccagcccccctcccagttctttgccatc gacagcgcacgcggcatcgtcacagtgatccgggagctggactacgagaccacgcaggcc taccagctcaccgtcaatgccacggatcaagataagaccaggcctctgtctaccctggcc aacttggccatcatcatcacagacgtccaggacatggaccccatcttcatcaacctgcct tacagcaccaacatctacgagcattctcctccgggcacgacagtgcgaattatcactgcc attgaccaggataaaggacgtccccggggaattggctacactatcgtctcagggaatacc aacagcatctttgccctggactacatcagcggggcactgaccttgaacggcctgctggac cgggagaaccccctgtacagccatggcttcatcctgaccgtgaagggcacagagctgaat gatgaccgcaccccatccgatgcgacagtgaccacaaccttcaacatcctggtgattgac atcaatgacaacgccccagagttcaacagctctgagtacagcgtggccatcactgagctg gcacaggtcggctttgctctccccctcttcatccaggtggtagacaaggacgagaacctg ggcctgaacagcatgttcgaggtgtacctggtggggaataactcccaccacttcatcatc tccccgacgtctgtccaagggaaggcagacattcgcatccgagtggcaatccccctggac tatgagactgtggaccgctacgactttgatctctttgccaatgagagtgtgcctgaccat gtgggctatgccaaggtgaagatcaccctcatcaatgagaatgacaaccggcccatcttc agccagccactgtacaatgtcagcttgtatgagaatgtcaccgtggggacctcagtgcta acagtcctggcaacggacaatgatgtgggcacctttggggaggtcaactacttcttcagc gatgaccctgaccggttctctctggacaaggacacaggactcatcatgctgattgccaga ctggactacgagctcatccagcgcttcaccttgacggtcattgcccgggacgggggcggt gaggagaccacaggccgggtcaggatcaacgtgttggatgtcaatgacaacatgcccacc ttccagaaggatacctatgtgggcgccctgagagagaacgagccttccgtcacacagctg gtgcgactgcgggcaacagatgaagactcgcctcccaacaaccagatcacctacagcatc gtcaatgcctctgccttcagcagctacttcgacatcagcgtgtatgaaggctatggtgtg atcagcgtgagccgccccctggattatgaacagatacccaatgggctgatttatctgacc gtcatggcaaaggacgctggcaaccctcctctgaacaacactgtctctgtcaccattgag gtgtttgatgagaacgacaaccccccgaccttcagcaagcctgcctactttgtgtctgtg gtggagaacatcatggcaggagccacagtgctgttcctgaatgccacagacctggaccgc tcccgggaatacggccaggagtccatcatctactccttggagggctcttcccagttccgg atcaatgcccgctcaggtgaaattaccaccacctccctgcttgaccgtgagaccaagtct gagtacatcctcatcgtccgggcagtggatgggggagtgggccacaaccagaaaactggc atcgccactgtgaacatcaccctcctggacatcaatgacaaccaccccacctggaaggac gctccctactacatcaacctggtggagatgacccctccagactctgacgtgaccacggtg gtggccgtggacccagacgtgggggagaacggcaccctggtgtatagcatccagccaccc aacaagttctacagcctcaacagcagcacaggcaagatccgcaccacccacgtcatgctg gaccgggagaatcccgacccccacgaggcggagctgatgcgcagaatcatcgtctctgtc acggactgtggcacaccccctctgaaagccaccagcagcgccaccgtgtttgtgaacctc ttggacctcaatgacaatgaccccacctttcagaacctgccttttgtggccgaggtgctt gaaggtacccctgcaggggtctctgtctaccaggtggcggccatcgacctggacgagggc ctgaacgggctggtgtcctaccgcatgcaggtgggcatgccccgcatggactttgtcatc aacagtagcagcggtgtggtggtcaccaccgccgagctggaccgcgagcgcatcgccgag taccagctgcgcgtggtggccagcgatgcaggcacgcccaccaagagctccaccagcacg ctcaccattcgagtgctggatgtgaatgacgagacgcccaccttcttccctgccgtgtac aatgtctctgtgtcggaggacgtgccacgggagttccgggtggtctggctgaactgcacc gacagcgacgtgggcctcaatgctgagctcagctacttcataacaggtggaaacgtggat gggaagttcagcgttggctaccgcgatgccacggtgagaacagtggtgaacctggaccgg gagaccacagccacatacacgctcgtcctggaggccatcgacaacggccccgtgggcaag cggcgcacgggcacggctaccgtgtttgtcaccgtcctggatgtgaatgacaaccggccc atctttctgcagagcagctacgaggccagcgtctccgaggacatccctgagggccacagc atcgtgcagctaaaagccacagatgcagatgagggcgagtttgggcgtgtgtggtaccgc atcgttcatggtaatcatggcaacaacttccggatccacatcagcaatgggctcctcatg cgagggccccggcccctggaccgggagcggaactcgtcacacgttctgatagtggaggcc tacaaccatgacctgggccccatgcggagctccgtcagggtgattgtgtatgtggaggat gtcaacgacgaggccccggtgttcacgcagcagcagtacaaccgcctggggcttcgcgag acagcgggcattggcacatcagtcatcgtggtccgagccacggaccgagacacaggggac ggaggcctggtgaactaccgcatcctgtcgggcgctgaggggaagtttgagattgatgag agcacggggcttattatcactgtggattacctggactacgagaccaagaccagctacctg atgaacgtgtccgccactgaccaggcactccccttcaaccagggcttctgcagcgtctat atcactctgctcaacgagctggacgaggctgtgcagttctccaatgcctcttatgaggct gccatcttggagaatctggccctgggcactgagattgtgcgtgtccaggcctactccatc gacaacctcaaccagatcacctaccgctttgatgcctacaccagcgcccaggccaaagcc ctcttcaagatagatgccatcacgggtgtgatcacggtcaagggcctggtggatcgggag aaaggtgacttctacactttgacggtggtggcagacgacggcggccccaaggtggactcc accgtgaaggtctacatcactgtgctggacgagaatgacaacagcccccggttcgacttc acctccgactcagcgatcagtgtgcctgaggactgctctgtgggccagcgcgtggccact gtcaaggcccgggatccagacgctggcagcaacgggcaggtggtcttttctctggccgct ggtaacatcgccggggcctttgagatcgtcaccaccaacgactccattggcgaaatattt gtggccagacccctggacagagaagagctggaccactacatcctcaaggttgtggcatcc gaccgtggcacccctccacggaagaaggaccacatcctgcaggtgaccatcctggacatc aatgacaaccctccagtgatcgagagcccctttggatacaacgtcagcgtcaatgagaac gtgggcgggggcactgctgtggtccaggtgagagccaccgaccgtgacatcgggatcaac agcgtcctgtcctactatatcaccgggggcaatgaggacatgaccttccgcatggaccgc gtcagtggcgagatcgccactcgccccgccccacccgaccgcgagcgtcagagcttctac cacctggtggtcaccgtggaggacgagggcacccctaccctgtcggccaccacccacgtg tatgtgaccatcgtggatgagaacgataatgcgcccgtgttccagcagccccactacgag atcttactggatgagggcccggacacaatcaacaccagcctcatcaccatccaggccctg gatctagatgaagggcccaacggcacagttacctatgccatcgtggcaggcaacatcatc aacacctttcgtatcaacagacacacgggcatcatccgtgctgccaaggagctggactat gagatcagccacggccgctacaccctgattgtcaccgcagcggaccagtgcccactcctg tcacatcgcctcacttctaccaccacggtacttgtgaatgtgaatgacatcaacgacaac gtgcccaccttccccagagactacgaggggccatttgatgtcactgagggccagccagga cccagagtgtggaccttcctagcccatgaccaggactcaggccccaatgggcaggtggag tacagcatcgtggatggagaccctctgggggagtttctgatctctcccgtggagggggtg ctgcgggtccggaaggatgtggagctggaccgggaggccattgctttctacaacctgacc atctgtgcccgagacagaggggtgcccccgctcagctccacgatgctggtggggatccgg gtgctggacatcaacgacaacgaccctgtgctgctcaacctgcccatgaacgtcaccatc agtgagaacagccccgtctccagtttcgtcgctcgtatcctggccagcgacgctgacagc gggtgcaacgccctcctcaccttcaacatcactgcaggcaatcgagagcgggccttctcc atcaatgccacgacagggatcatcacagtgaaccggcccctggaccgtgagcggatccca gaatacaggctgaccatctccgtgaaggacaacccagagaacccacgcatagccaggagg gattttgacttgctgctcatctttcttgcggatgagaatgacaaccaccctgtctttact gagagcacctacctggcggaggtgatggagaactctcctgctgggacctccctgacggtg ctcaacgggcctgtcctggccctggatgcagacctggacgtctacgctgtggtgacctac cagctgctgggcgcccagagcgggctctttgacattgacaacagcacgggtgtggtgacg gtgaggtcaggtatcgtcattgaccgggaggccttctcaccccccgtcctggagctgctg ctgctggctgaggacatcgggctgctcaatggcaccgccgacctgctcgtcaccatcctg gacgacaatgacaaccagcccacctttagccctgctgctgtcgccgtccacctgctggag aactgcccaccagggttctcagtccttcagatcacagccacggatgaggacagtggcctc aatggggagctgatctaccgaatagaagctggggctcaggaccgcttcatcatccacccg gtcagcggcatcatctgcgtcggcaatgctaccatcgacagggaggagcaggaatcgtat cggctgacagtagtggccaccgaccggggctccgtccctctctcgggcacagccaccgtc acggtccttatcgatgacatcaatgactcccgccccgagttcctcaaccccatccagacg gtgagcgtgctggagtcagctgagccaggcactgtcattgccaacgtcaccgccattgac cgtgacctcaatcctaagctggagtaccacatcatcgacattgtggccaaggacgacact gaccgcctggtgcctgaccaggaggacgcctttgctgtgaatatcaacacagggtctgta atggtgaaatcccctctgaaccgggagctggttgccacctatgaggtcactctctctgtg attgacaatgccagtgacctaccagagcgctccgtcagtgtgccaaatgccaaactgacg gtcaacatcctggacgtcaatgacaacacaccccagttcaagcccttcggaatcacctac tacacagagcggatcctggagggggccaccccaggcaccacgctcatcgctgtggcagct gtagatcccgacaagggtctcaatgggctgatcacctattccctgctgaacctgatgccc ccgggctatgtccagctggaagactcctcagccgggaaggtcgttgccaaccggacagtg gactatgaggaagtgcacgggctcaacttcaccgtgagggcctcagacaatgggtcccca ccccgggccgctgagatccctgtctacctggagattgtggacatcaatgacaacaacccc atctttgaccagctgtcctaccaggaagctgtctttgaggatgttcctgtgggcacagtc atcttgacggtcactgctactgatgctgactcaggcaacttcgccctcattgagtatagc cttgtggatggtgagggcaagtttgccatcagccccaccacaggtgacatctatgtgctg tcctctctggaccgggagaagaaggaccactatatcctgactgccttggccaaagacaac cctggggatgtggccagcaaccgtcgagaaaattcggtgcaggtggtgatccaggtgcta gacgtcaacgactgccggccgcagttctccaagctccagttcagcacgagcgtgtacgag aatgagccggcaggcacctctgtcatcaccatgatggccaccgaccaggacgagggctcc aatgcggagttggcctactcacttgagggccccggcgtggaggccttccacgtggacatg gactcgggcctggtgaccacaaagcggccactgcagtcctacgagaggttcagcctgacc gtagtggccacagacggcgggcagcccccgctctggggcaccaccatgctcctggtggag gtcatcgacgtcaatgacaaccgccctgtctttgtgcgcccacccaatggcactatcctc cacatcagagaggagatcccactgagttccaacgtgtacgaggtctacgccacggacaag gatgagggcctcaatggggccgtgcgctacagcttcctgaagacgacaggcaaccgggac tgggagtacttcaccatcgacccaatcagcggcctcatccagacggcgcagcgcctggac cgggagaagcaggccgtgtacagcctcatcctggtggccagtgacttgggccagccggtg ccctatgagaccatgcagccgctgcaggtggctctggaggacatcgacgacaacgaaccc ctcttcatgaggccgccaaaaggcagcccccagtaccagttgctgacggtgcccgagcac tcaccacgtggcacccttgtgggcaacgtgacaggcgctgtggatgcagacgagggctcc aacgccatcgtgtactacttcatcgcagctggcaacgaagagaagaacttccagctgcag cccgacgggcgtctgctggtgctgagggacctggacagggagcgcgaagccatcttctcc ttcatcgtcaaggcctcaagcaatcgcagctggacacctccccgcaggccctccccagcc cttgacctggtcactgacctcagcctgcaggaagtgcgtgtcgtgctggaggacatcaac gatcagccgccacgcttcaccaaggctgagtacactgcaggagtggccaccgacgccaaa gtgggctcggagctgatccaggtgctggccctggacgcagacattggcaacaacagcctt gtcttctatagcatcctggccatccactacttccaggccctggccaatgactctgaggac gtgggccaggtcttcacaatggggagtgtggatggcatcctgcgcaccttcgacctcttc atggcctacagccctggttactttgtggtggacatcgtggcccgggacctggctggccac aatgacacagctgtcatcggcatctacatcctgagggacgaccagcgggtcaagattgtc attaacgagatccccgaccgcgtgcgtggctttgaggaggagttcatccgcctgctctcc aacatcaccggtgctatcgtcaacaccgatgatgttcagttccacgtggacaagaagggt cgggtgaacttcgcacagacggagctgctcatccacgtggtgaaccgcgacaccaaccgc atcctggatgtggaccgggtgatccagatgatcgacgaaaacaaggagcaactgaggaat ctgttccggaactacaacgtcctggacgtgcagcccgccatctctgtccgcccacccgat gacatgtccgccctgcagatggcgatcattgtcctggccattctcctcttcctggctgcc atgctcttcatcctcatgaactggtactacaggactgtacacaagaggaagctcaaagcc atcgtggctggctccgcagggaatcgtggtttcattgacatcatggacatgcccaacacc aacaagtattccttcgatggggccaaccctgtgtggctggatcctttctgccggaacctg gagctggccgcccaggctgagcacgaggatgacctgccggagaacctgagtgaggtcgct gacctgtggaacagccccacccgcacccacggaactttcgggcgtgaaccagcggcggtc aagcctgacgatgaccagtacctgcgggctgccatccaggagtatgataacattgccaag ctgggccagatcatccgggaggggcccatcaagggatcgctgctgaaggtggtcctggag gattacctgcggctcaaaaagctctttgcacagcggatggtgcaaaaagcctcctccagc cactcctccatctccgagctaattcagaccgagctggaagaggagccaggggagcgcagc cccggccagggcagcctgcgtttctgccacaagccgcctaccgagctcagagggccagac gggatccatgtgatacacgggagcacgggcacgctgctggccactgacctcaacagcctg cctgaggatgaccagaagggcctgggccgctcactggagatgctgacgacggccgaggcc agcgcctttgagcgcaacgcccgcacagagtccgccaaatccacacccctgcacaagctt cgcgatgtgatcatggagagccccctggagatcacggagctgtga

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