Bubalus bubalis (water buffalo): 102397474
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Entry
102397474 CDS
T05912
Symbol
CFTR
Name
(RefSeq) cystic fibrosis transmembrane conductance regulator isoform X3
KO
K05031
cystic fibrosis transmembrane conductance regulator [EC:
5.6.1.6
]
Organism
bbub
Bubalus bubalis (water buffalo)
Pathway
bbub02010
ABC transporters
bbub04024
cAMP signaling pathway
bbub04152
AMPK signaling pathway
bbub04530
Tight junction
bbub04971
Gastric acid secretion
bbub04972
Pancreatic secretion
bbub04976
Bile secretion
Brite
KEGG Orthology (KO) [BR:
bbub00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
102397474 (CFTR)
09132 Signal transduction
04024 cAMP signaling pathway
102397474 (CFTR)
04152 AMPK signaling pathway
102397474 (CFTR)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
102397474 (CFTR)
09150 Organismal Systems
09154 Digestive system
04971 Gastric acid secretion
102397474 (CFTR)
04972 Pancreatic secretion
102397474 (CFTR)
04976 Bile secretion
102397474 (CFTR)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
bbub02000
]
102397474 (CFTR)
Enzymes [BR:
bbub01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.6 channel-conductance-controlling ATPase
102397474 (CFTR)
Transporters [BR:
bbub02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC7 subgroup
102397474 (CFTR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
CFTR_R
ABC_tran
AAA_21
SMC_N
AAA_29
AAA_16
T2SSE
DO-GTPase2
RsgA_GTPase
DUF87
MeaB
Zeta_toxin
nSTAND3
NTPase_1
Intein_splicing
Motif
Other DBs
NCBI-GeneID:
102397474
NCBI-ProteinID:
XP_044802563
EnsemblRapid:
ENSBBUG00015008060
LinkDB
All DBs
Position
8:complement(50361952..50578802)
Genome browser
AA seq
1470 aa
AA seq
DB search
MAFPRVSWTRPILKKGYRQRLELSDIYHISSSDSADNLSEKLEREWDRELASKKNPKLIN
ALRRCFFWRFMFYGIILYLGEVTKAVQPLLLGRIIASYDPDNKVERSIAIYLGIGLCLLF
IVRTLLLHPAIFGLHHIGMQMRIAMFSLIYKKTLKLSSRVLDKISIGQLVSLLSNNLNKF
DEGLALAHFVWIAPLQVTLLMGLLWELLQAFTFCGLAFLIVLALLQAGLGKMMMKYRDQR
AGKINERLVITSEMIENIQSVKAYCWEEAMEKIIENLRQTELKLTRKAAYVRYLNSSAFF
FSGFFVVFLSVLPYALLKGIILRKIFTTISFCIVLRMAVTRQFPWAVQTWYDSLGAINKI
QDFLQKQEYKTLEYNLTTTDVVMENVTAFWEEGFSKLFEKAKENNTNRKISNGDNSLFFS
NLLLGTPVLKDISFKIERGQLLAVAGSTGAGKTSLLMMIMGELEPSEGKIKHSGRISFCS
QYSWIMPGTIKDNIIFGVSYDEYRYRSVIKACQLEEDISKFAEKDNIVLGEGGITLSGGQ
RARISLARAVYKDADLYLLDSPFGYLDVLTEKEIFESCVCKLMANKTRILVTSKMEHLKK
ADKILILHEGSIYFYGTFSELQNQRPDFSSKLMGCDTFDQFTPERRNSIITETLRRFSLE
GDTSVSWNETKKPSFKQTGEFGEKRKNSILSSINSVRKFSVVQKTSLQMNGIEGAADAPL
ERRLSLVPHSEPGEGILPRSNAVNSGPTFLGGRRQSVLNLMTGSSVNQGQSIHRKTATST
RKMSLAPQASLAEIDIYSRRLSQDTGLEISEEINEEDLRDCFFDDVENIPAVTTWNTYLR
YITVHKSLMFVLIWCLVVFLVEVAASLVVLCLFPKIFFQDKGNSTKSANNSYAVIITSTS
SYYIFYIYVGVADTLLALGLFRGLPLVHTLITVSKTLHHKMLQSVLQAPMSTLNMLKTGG
ILNRFSKDIAVLDDLLPLTIFDFVQLLLIVIGAVVVVSVLQPYIFLATVPVIAAFILLRA
YFLHTSQQLKQLESEGRSPIFTHLVTSLKGLWTLRAFGRQPYFETLFHKALNLHTANWFL
YLSTLRWFQMRIEMIFVIFFIAVTFISILTTGEGEGRVGIILTLAMNIMGTLQWAVNSSI
DVDSLMRSVSRVFKFIDMPTEDGKPNNSFRPSKDSQPSKVMIIENQHVKKDDIWPSGGQM
TVKDLTAKYTDGGNAILENISFSISPGQRVGLLGRTGSGKSTLLLAFLRLLNTKGEIQID
GVSWDSITLQQWRKAFGVIPQKVFIFSGTFRKNLDPYGQWSDQEIWKVADEVGLRSVIEQ
FPGKLDFVLVDGGCVLSHGHKQLMCLARSVLSKAKILLLDEPSAHLDPITYQIIRRTLKQ
AFANCTVILSEHRIEAMLECQRFLVIEENKVRQYDSIQRMLSEKSLFRQAISPADRLKLL
PHRNSSRQRSRSNIAALKEETEEEVQETKL
NT seq
4413 nt
NT seq
+upstream
nt +downstream
nt
atggcgtttccacgagtcagctggaccagaccaattttgaagaaaggatacagacaacgc
ttggaattatcagacatataccatatctcttcttctgattctgctgacaatctatctgaa
aaattggaaagagaatgggacagagaactggcttcaaagaaaaatcccaaactcataaat
gcccttcgacgatgctttttctggagatttatgttctatggaatcatattatatttaggg
gaagtcaccaaagcagtccagcctctcttactgggaagaatcatagcttcctatgaccca
gataacaaggtggaacgctccattgccatttacttaggcataggcctatgccttctcttt
atcgtgaggacactgctcctgcacccagccatttttggtctccatcacattggaatgcag
atgagaatagctatgtttagtttgatttataagaagactttgaagctatcaagccgtgtt
ctggataaaataagtattggacaacttgttagtctcctttccaacaacttgaacaaattt
gatgaaggactcgcactggcacattttgtgtggatcgctcctctgcaagtgacgctgctc
atggggctgctctgggagttgttgcaggccttcaccttctgtgggcttgctttcctcata
gtcctcgcccttcttcaagccggattagggaaaatgatgatgaagtacagagatcagaga
gctggaaagatcaatgaaagactggtgataacgtcagaaatgattgaaaatatccaatca
gttaaggcatactgctgggaagaagcaatggaaaaaatcattgaaaacctaagacaaaca
gaactgaaacttacccggaaggcagcctatgtgagatacctcaatagttcagccttcttc
ttctcagggttctttgtggtatttttatctgtgcttccttatgcactgctcaaaggaatc
atccttcgaaaaatattcacaaccatctcattctgcatcgttctgcgcatggcagttact
cggcagttcccctgggctgtacaaacttggtatgattctcttggagcaataaacaagata
caggatttcttacaaaagcaagaatataagacattggaatataacttaacaactacagat
gtagtgatggagaatgtaacagccttctgggaagagggatttagtaaattatttgagaaa
gcaaaagaaaataataccaatagaaaaatttccaatggtgataacagcctcttcttcagt
aacttacttcttggtactcctgtcctgaaagatatcagtttcaagatagaaagaggacag
ttgttggcagttgctggatctacgggagcaggcaagacttcacttctcatgatgattatg
ggagaattggaaccttcagagggtaaaattaagcacagtggaagaatttcattctgctct
cagtattcctggatcatgcctggaaccattaaagataacatcatctttggtgtttcctat
gatgaatatagatataggagtgtcatcaaagcatgccaactagaagaggacatctccaag
tttgcagagaaagacaacatagttcttggagaaggtggaatcacactgagtggaggtcag
cgagcaagaatttctttagcaagagcagtatacaaagatgctgatttgtacctattagac
tctccttttggatatctagatgttttaacagagaaagaaatatttgaaagctgtgtctgt
aaattgatggctaacaaaactaggattttggtcacttctaaaatggagcacttaaagaaa
gctgacaaaatattaattttacatgaaggtagcatctatttttatgggacattttctgaa
ttacaaaatcagcggcccgacttcagctcgaagctcatgggatgtgacactttcgaccag
tttactccagaacgaagaaattcaatcataactgagactttacggcgtttctcattagaa
ggagatacttctgtgtcctggaatgaaacgaaaaagccttcttttaaacagactggagag
tttggtgaaaaaaggaagaactccattctcagttcaatcaactctgtaaggaaattttca
gttgtacaaaagacttcattacaaatgaatggtatcgaaggagctgctgatgcgccttta
gagagaagactatccttagttccccattctgaacctggagaggggatcctgcctcggagc
aatgcagtcaacagtggccccacatttctgggagggaggaggcagtccgttctgaacctt
atgaccggctcctcagtgaaccaaggtcaaagcattcatcgaaagacagcgacatccaca
cgaaaaatgtcactggctcctcaggcaagcttagccgaaatagatatatattcaagacgg
ttatctcaagatactggcttggaaataagtgaagaaattaatgaagaagatttaagggat
tgcttttttgatgatgtggagaacataccagcagtgactacatggaacacataccttcga
tatattactgtccacaagagcttaatgtttgtgctaatttggtgcttagtcgtttttcta
gttgaggtggctgcttctttggttgtgttgtgcctatttccgaaaatattttttcaagac
aaaggaaacagtaccaagagtgcaaataacagttatgcagtgatcatcaccagcaccagc
tcgtattatattttttacatttatgtgggagtagctgacactttgcttgctctaggactc
ttcagaggtttaccactggtgcatactctaatcacagtgtcaaaaactttacaccacaaa
atgctacagtctgttcttcaagcccctatgtcaaccctcaacatgttgaaaacaggtggg
attcttaatagattctccaaagatatagcagttttggatgatcttctgcctcttaccata
tttgactttgttcagttgttattgattgtgatcggagctgtggtggtcgtctcagtttta
cagccctacatcttcctagctacagtgccagtgatagcggcttttattctcttgagagcc
tacttcctccacacctcccagcaactcaagcagctggaatctgaaggcaggagtccaatt
ttcactcatcttgttacaagcttaaaaggactatggacacttcgtgcctttggacggcag
ccttactttgaaactttattccacaaagctctgaatttacacactgccaactggttcttg
tatctgtcaacactgcgctggttccaaatgagaatagaaatgatttttgtcatcttcttc
attgctgttaccttcatttccattttaacaacaggtgaaggagaaggaagagttgggatt
attctaactttagccatgaatatcatgggtacattgcagtgggctgtaaactctagcata
gatgtggatagcttgatgcgatctgtgagccgagtctttaagtttattgatatgccaaca
gaagatggtaaacctaacaattcattcagaccatccaaggatagtcagccctcaaaagtt
atgatcattgagaatcaacatgtgaagaaagatgacatctggccctcagggggccaaatg
actgtcaaagacctcacagcaaagtatacagatggagggaatgccatactagagaacata
tccttctcaataagtcctggccagagggtgggcctcttgggaagaactggatcagggaag
agcactttgttactggcttttttgagactgctgaataccaaaggagaaatccaaatagat
ggtgtgtcttgggattcaattactttgcaacaatggaggaaggcctttggagtcatacca
cagaaagtattcatcttttctggaacatttagaaaaaacttggatccctatggacagtgg
agtgatcaagaaatatggaaagttgcagatgaggtcggactcagatctgtgatagagcag
tttcctgggaagcttgattttgtccttgtggatgggggttgtgttctaagccacggccac
aagcagttgatgtgcttggccagatctgttctcagtaaagcaaagatcttgctgcttgac
gaacccagtgctcatttggatccaataacataccagatcattcgaagaaccctaaaacaa
gcatttgctaattgcacagtaatcctctctgaacacaggatagaagcaatgttagaatgt
caacgatttttggtcatagaggagaacaaggtgcggcagtatgattccatccagaggatg
ctgagcgaaaagagcctcttccggcaggccatcagccccgcagaccgcttgaagctcttg
ccccaccggaactcgagcaggcagagatctcggtccaacatcgccgctctgaaggaggag
acagaagaagaggtgcaagaaacaaagctttag
DBGET
integrated database retrieval system
