Bubalus bubalis (water buffalo): 102410611
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Entry
102410611 CDS
T05912
Symbol
RFX1
Name
(RefSeq) MHC class II regulatory factor RFX1 isoform X2
KO
K09173
regulatory factor X 1/2/3
Organism
bbub
Bubalus bubalis (water buffalo)
Brite
KEGG Orthology (KO) [BR:
bbub00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bbub03000
]
102410611 (RFX1)
Transcription factors [BR:
bbub03000
]
Eukaryotic type
Other basic domains
RF-X
102410611 (RFX1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RFX1_trans_act
RFX_DNA_binding
Motif
Other DBs
NCBI-GeneID:
102410611
NCBI-ProteinID:
XP_025149451
EnsemblRapid:
ENSBBUG00015009149
LinkDB
All DBs
Position
9:complement(99359459..99394813)
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AA seq
1065 aa
AA seq
DB search
MATQAYVTELQAAPQPSQPPQAPPQAQPPPPPSAAPQPPQPPATAATPQPQYVTELQNPQ
PQAQPPGSQKPYVTELPAAPTPSQPAGAPTPSPASQQYIVVTVSEGAMRASETVSEASPG
STASQTGVPTQVVQQVQGTQQRLLVQTSVQAKPGHVSPLQLTNIPVSQQRSPVQANSSSG
KTAGAPTGTVPQQLQVHGVQQSVPVTQERSVVQATPQVPKAGPVQQLTVQGLQPVHVAQE
SSGSQFPARKAEQQEPWPTPPPEPPPPRPPTPGPGPGALAPEPPACRGAAAQLGSPEPLP
PHYEPGAEQWVELVGFLPPHLLLPQQKVVLEPLPGLPARASPDQRVRIQRVPQVLVFGTA
ATALKVQQLQQVPVSHVYPSQVQYVEGGDASYTASAIRSSTYSYPETPLYPQTAGTSYYE
AAGTAAQVSTPATSQAVASSGSVPMYVSGGQVVASSTSSGSGAGSGSSSGSGSGSSGGGG
GGGGGGGGGGGSGGGAGTYVIQGGYMLGGASQSYSHTTRASPATVQWLLENYETAEGVSL
PRSTLYCHYLLHCQEQKLEPVNAASFGKLIRSVFMGLRTRRLGTRGNSKYHYYGLRIKAS
SPLLRLMEDQQHMAMRGQPFSQKQRLKPIQKMEGMTNGVAVGPQQATGLSDISAQVQQYQ
QFLDASRSLPDFSELDLQGKVLPEGIGPGDIKAFQVLYREHCEAIVDVMVNLQFTLVETL
WKTFWRYNLSQPSEAPPLAVHDEAEKRLPKASLVLLSKFEPVLQWTKHCDNVLYQGLVEI
LIPDVLRPIPSALTQAIRNFAKSLESWLTHAMVNIPEEMLRVKVAAAGAFAQTLRRYTSL
NHLAQAARAVLQNTAQINQMLSDLNRVDFANVQEQASWVCRCEDRVVQRLEQDFKVTLQQ
QNSLEQWAAWLDGVVSQVLKPYQGSTGFPKAAKLFLLKWSFYSSMVIRDLTLRSAASFGS
FHLIRLLYDEYMYYLIEHRVAQAKGETPIAVMGEFANLATSLNPLDPDKDEEEEEEEESE
DELPQDISLAAGGESPALGPEALEPPAKLARTDARGLFVQALPSS
NT seq
3198 nt
NT seq
+upstream
nt +downstream
nt
atggcaacacaggcgtacgttactgagttacaggcggccccgcaaccatcccagccacca
caggctccgccgcaagcccagccgccaccgccgccctctgcggcaccccagcccccccag
ccccccgccaccgccgccaccccccagccccagtatgtcaccgagctgcagaatccgcag
ccccaggcacagccaccgggcagccagaagccgtatgtgacagagctcccggctgccccc
acgccctcgcagccggccggcgcacccaccccgtccccggcatcccagcagtacatcgtg
gtcaccgtctccgagggtgccatgcgggccagcgagactgtgtcagaggccagccccggc
tccacggctagccagaccggagtgcccactcaggtggttcagcaggtgcagggcacccag
cagcggctactggtccagacaagtgtgcaggccaagccgggccacgtgtcacccctccag
ctcaccaacatcccggtgtcccagcagcggtcaccggtgcaggccaacagctcctccggc
aagacggccggggcccccacgggcacggtgccacagcagctgcaagtccatggcgtccag
cagagtgtccccgtcacccaagagaggtcggtggttcaggccactccacaggtgcccaaa
gctggccccgtgcagcagctcaccgtgcaaggactccagccggtccatgtggctcaagag
agctcaggcagtcagtttcccgctaggaaggcagagcagcaagagccctggcccacgccg
ccaccggagccgccgccgccccggccgcccacgcctgggcccgggccgggtgcgctggcc
ccggaaccgccagcttgccgcggggcggccgcgcagctaggcagccctgagccgctgccg
ccccattacgaaccgggcgccgagcagtgggtggagctggtgggcttcctgcccccgcac
ctgctcctgccgcagcagaaagtggtcctcgagccactacccgggctgccggcccgagcc
agccccgaccagagggtcaggatccagagagtcccccaggtgctagtgttcggcacggcc
gccacggccctcaaagtgcagcagctccagcaggtgccggtctcacacgtgtaccccagc
caagtgcagtacgtggagggtggcgatgccagctacacggcgagtgccatccgctccagc
acctactcctaccctgagacgccactgtacccacagacggcaggcaccagctactacgag
gccgcgggcacggctgcccaggtcagcacccctgccacttcccaggcggtggccagcagc
ggctccgtgcccatgtacgtgtctggcggccaggttgtcgccagctccaccagcagtggg
agtggagccggcagcggcagcagcagcggcagcggcagcggcagcagcggcgggggtggt
gggggtgggggtggtggcggcggcggcggcggcagcggcggtggagcaggcacctacgtg
atccaaggcggctacatgctgggcggtgccagtcagtcctactcgcacaccacccgtgcc
tcaccagccaccgtccagtggctcctggaaaactatgagacggccgagggcgtgagcctg
ccgcggagcaccctgtactgccactacctgctgcactgccaggaacagaagctggagccc
gtcaacgccgcgtcctttggcaagctcatccgctccgtcttcatgggcctgcgcacccgc
aggctgggcaccaggggcaactccaagtaccactactatggcctgcgcatcaaggccagc
tcgcccctgctgcggctgatggaggaccagcagcacatggccatgcggggccagcccttc
tcccaaaagcagaggctgaaacccatccagaagatggagggtatgaccaacggtgtggcc
gtggggccacagcaggccactggactctcggacatcagcgcccaggtccagcagtaccag
cagtttctggatgcctcaagaagcctccctgacttctcagagcttgatctccagggcaaa
gtgctgcccgagggcatcggacctggggacatcaaggccttccaggtcctataccgggaa
cactgtgaggccatcgtcgatgtcatggtgaacctgcagttcacactggtggaaacgctc
tggaaaaccttctggaggtacaacctgagccagcccagcgaggcgccgccgctggctgtg
cacgatgaggctgagaagcggctgcccaaggccagcctggtgctcctctccaagttcgag
cccgtgctgcagtggaccaagcactgtgacaacgtgctgtaccagggcctggtggaaatc
ctcatccccgatgtgctgcggcccatccccagtgccttgacccaagcgatccggaacttt
gccaagagcctggagagctggcttacccacgccatggtgaacatccccgaggagatgctg
cgggtgaaggtggcagcggccggcgccttcgcacagaccctgcgtcgctacacgtcgctc
aaccacttggcacaggcggcacgcgctgtgctgcagaacactgcacagatcaaccagatg
ttgagcgatctcaaccgcgtggacttcgccaacgtgcaggagcaggcctcgtgggtgtgc
cgctgcgaggaccgcgtggtgcagcggctggagcaggacttcaaagtgacgctgcagcag
cagaactcactggagcagtgggcggcctggctggacggcgtcgtgagccaggtgctcaag
ccctaccagggcagcaccggcttccccaaagccgccaagctcttcctcctcaagtggtcg
ttctacagctccatggtgatccgggacctgaccctgcgcagcgccgccagctttggctcc
ttccatctcatcaggctgctctacgatgagtacatgtactacctgatcgaacatcgtgtg
gcccaggctaagggcgagacccccatcgccgtcatgggcgagttcgccaatctggccacc
tctctgaaccccctggacccggacaaagatgaggaggaggaggaagaagaggagagcgag
gatgagctgccgcaggacatctcgctcgcggccggcggcgagtcgcctgcgctgggcccc
gaggctctggagccaccggccaagctggcgcggacagacgcgcgcggcctcttcgtgcag
gccctgccctccagctaa
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