Bufo bufo (common toad): 120995543
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Entry
120995543 CDS
T07950
Name
(RefSeq) S-adenosyl-L-methionine-dependent tRNA 4-demethylwyosine synthase TYW1-like
KO
K15449
tRNA wybutosine-synthesizing protein 1 [EC:
4.1.3.44
]
Organism
bbuf
Bufo bufo (common toad)
Brite
KEGG Orthology (KO) [BR:
bbuf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bbuf03016
]
120995543
Enzymes [BR:
bbuf01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.3 Oxo-acid-lyases
4.1.3.44 tRNA 4-demethylwyosine synthase (AdoMet-dependent)
120995543
Transfer RNA biogenesis [BR:
bbuf03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
120995543
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Flavodoxin_1
Wyosine_form
Radical_SAM
Flavodoxin_5
Motif
Other DBs
NCBI-GeneID:
120995543
NCBI-ProteinID:
XP_040280749
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Position
3:397236969..397481664
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AA seq
754 aa
AA seq
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MTGGCETLVLLLSAAAWVSAQPEEDGSAGPWDLLHTYLMVVWLNRFYIYSIAAFGVTVWI
CSQVITGRKKQVETLSHSDVPSLTSKAVKNSASDLSKEKEVFVSGVKIFYGSQTGTAKGF
ASALAEDVTSLGISVEIINMKDYDPDDHLVEETTSRNICVFLVATYTDGLPPEGAEWFCK
WLEEASNDFRFGKTFLKDLRYAVFGLGNSVYSSHFNTVGKSIDKWLWMLSASRVMTRAEG
DCNVVKSKHGSIEADFAAWKAKFLSRLKALANGEKKNCSGKCKKGKCKTHSVDEEQSKHG
ESEQEGSEEELYETTSESESEGEKEPGSGGLIDVEDLGKAMSSMKKAKKDQELNGEAGIV
GRSLQNSDKANEEPREMITPALQEALTKQGYRLIGSHSGVKLCRWTKSMLRGRGGCYKHT
FYGIESHRCMETTPSLACANKCVFCWRHHTNPVGTEWRWKMDQPEMIIQEAIENHQNLIK
QFRGVPGVKADRFEEGMAIKHCALSLVGEPIMYPEINRFLKLLHHKEISSFLVTNAQFPE
EIRSLEPVTQLYVSVDASTKDSLKKIDRPLFKDFWQRFLDSLTALADKQQRTVYRLTLVK
AWNVDELKAYADLVKLGHPDFIEVKGVTYCGESSASNLTMANVPWHEEVVHFVQELADML
PDYEIACEHEHSNCILIAHKKFKIDNEWWTWIDYERFQELIRTYEKSGGTKTFTALDYIA
KTPNWALFGSNERGFDPLDTRFQRKNKTKDISGC
NT seq
2265 nt
NT seq
+upstream
nt +downstream
nt
atgacgggcgggtgtgagacactggtcctgctgctgtcagcagcggcctgggtgagcgct
cagccagaggaagatggatccgctggaccatgggatcttctccatacatatttgatggtg
gtatggctcaacaggttctacatttattcaattgctgcatttggtgtcactgtctggatc
tgcagtcaggtgattacagggaggaaaaaacaggtagaaaccttgtcacacagtgacgtg
ccctcattgacaagtaaagcagtgaaaaacagcgcttctgatctaagtaaggagaaagaa
gtctttgtttcaggtgtcaagatcttctatggctctcagactggtactgccaagggcttt
gccagtgctcttgctgaagacgtcacttctctgggcatttctgttgaaattataaacatg
aaggactatgatccagacgaccatttggtcgaagagacaacaagtagaaacatttgtgtc
ttcctagttgctacttacactgatggattgcctcctgaaggtgcagagtggttctgcaaa
tggctggaagaagcctccaatgattttcgttttggaaaaaccttccttaaagacctgaga
tatgccgtgtttggattagggaactctgtatacagcagccatttcaacacggttggtaaa
agcattgataagtggctgtggatgctgagtgccagccgggtgatgacccgtgcggagggc
gactgtaacgtagtgaagagtaagcatggcagcattgaagcagacttcgctgcctggaag
gcaaagttcttgagcaggttgaaggctctggcgaatggggagaaaaagaactgtagtggt
aaatgtaagaaaggaaaatgtaagacacattctgtggatgaagagcagagcaagcatgga
gagtcggaacaggaaggctctgaggaagaactgtatgagacgaccagcgaatccgaatcg
gaaggggagaaggagccaggaagtggtggtcttatagatgttgaagatttgggaaaggca
atgagcagcatgaagaaagctaaaaaggaccaggaattaaatggagaagctggaattgta
gggagatctcttcaaaactctgacaaagcaaatgaggaaccaagagaaatgattacgcct
gctctccaggaggctctaactaagcaaggttacaggctgattggaagccattcaggtgtc
aagctttgccgctggacaaagtcaatgctgagaggaagaggaggttgttataagcacaca
ttttatggcattgaaagtcacagatgtatggaaactactcccagtctggcttgtgcaaac
aaatgtgtgttctgctggagacatcataccaatccagtgggaactgaatggagatggaag
atggaccagccggagatgattatacaggaagccattgaaaatcaccaaaacctgatcaaa
caatttagaggagtacctggtgtgaaggctgatcggtttgaggaaggcatggccattaag
cactgtgccttgtctttagtgggagaaccaattatgtatcctgagatcaacagatttcta
aaattacttcatcacaaggaaatctctagttttctggttacaaatgctcaattcccagaa
gaaataaggtctctggagccagtcacacagttatatgtgagtgtggatgcgagtactaag
gacagccttaagaaaattgatcgcccactctttaaggatttttggcaaaggtttcttgac
agcttgacggctttggcagataagcaacaacggacggtatacaggctgacccttgtaaag
gcatggaatgtggatgagctcaaagcatatgcagaccttgtgaaactaggacatccagac
ttcatagaagttaagggtgtgacctactgtggagagagttctgctagcaatttaactatg
gcaaacgtgccttggcatgaagaggttgttcattttgtccaagagttggcagatatgctt
ccagattacgaaatagcatgtgaacacgagcattcaaattgtatattgattgctcataaa
aagttcaagattgataatgagtggtggacctggatcgattatgagagatttcaagaactg
attcgcacatatgagaaaagtggaggcaccaagacctttacagccttggactacatagca
aaaactcccaattgggctctgtttggttccaatgagagaggctttgatcctctagataca
cgttttcaacgtaaaaataaaactaaggacatctctgggtgctaa
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