Bifidobacterium breve ACS-071-V-Sch8b: HMPREF9228_0112
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Entry
HMPREF9228_0112 CDS
T01844
Name
(GenBank) transcriptional regulator, LacI family
KO
K05499
LacI family transcriptional regulator, repressor for deo operon, udp, cdd, tsx, nupC, and nupG
Organism
bbv
Bifidobacterium breve ACS-071-V-Sch8b
Brite
KEGG Orthology (KO) [BR:
bbv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bbv03000
]
HMPREF9228_0112
Transcription factors [BR:
bbv03000
]
Prokaryotic type
Helix-turn-helix
LacI family
HMPREF9228_0112
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_3
LacI
Peripla_BP_4
Peripla_BP_1
TetR_N
HTH_Tnp_ISL3
HTH_23
HTH_7
HTH_38
HTH_AsnC-type
HTH_6
HTH_3
Motif
Other DBs
NCBI-ProteinID:
AEF26475
LinkDB
All DBs
Position
complement(141975..143006)
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AA seq
343 aa
AA seq
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MAKASIQAVAKEAGVSVSTVSRTFAKPDLVLPETRDKVMAAAEKLDYSISRSAAALKSGQ
SFRIALLASETITTWFNANIFAGLDSVLRPAGYDTVAYPMRNAEERHDFFVDLPVRRNAD
AVIVSSFNIEPAEVERLKHMHVPIIGINIPSTDGFDSGVSIDDRTATRAAVEHLIALGHR
GIAFVGGTPAETNMRYSAESRLQGVLDAQAAHPELTVTNLQVPRGATETSAALNAVLTAP
AGTTAFCFEDDELALPVLYRLRQYGKRVPQDISIVGFDDVEMSQAVGLTTMHQDPFAMGA
DAGRMALEAIAGGPIEPAFIQPDVPLVLRETTAPPAAPVPAQG
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaagcaagcattcaagcggtggcaaaggaagccggcgtctccgtatccacggtg
tcccgaaccttcgccaagcccgacctggtactccctgaaactcgtgacaaagtaatggcc
gccgccgaaaagctcgattattccatctcccgatcggccgccgcgctgaagtccggccag
tcgttccgcatcgcactgctggccagcgagaccatcaccacctggttcaatgcgaacatc
tttgcagggctcgactcggtgctgcgccctgctggctatgacaccgtggcctaccccatg
cgcaacgccgaagagcgtcacgatttctttgtggacctgcccgtgcgccgcaatgcagat
gcggtaatcgtcagctcgttcaacatcgagccggccgaggtggagcgcctcaagcatatg
catgtgccgatcatcggcattaacatcccttccacggacgggttcgactccggcgtaagc
attgatgatcgtaccgccacccgcgcggccgtcgaacacctcatcgcgctggggcatcgg
ggcatcgcattcgttggcggcactcccgccgaaaccaatatgcgctatagcgccgaatcg
cgactgcagggcgtgctggacgcgcaggccgcgcacccggagctcaccgtgaccaacctt
caggtgccccgcggcgcaacggagaccagcgcggctctgaacgcggtactgaccgccccg
gccggcaccactgcattctgttttgaggacgatgagctggcgctgccggtgctgtatcgc
ctgcgccagtacggcaaacgcgtgccgcaggatatttcgattgtgggatttgacgacgtt
gaaatgtctcaggccgtggggctaaccaccatgcatcaggatccgtttgccatgggtgcc
gacgctgggcgcatggcgttggaggccattgcgggcgggccgattgaaccggcgttcatt
cagcccgacgtgccgctcgtgctgcgtgagaccactgcgcctcctgccgcgcccgtgcct
gcgcaggggtga
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