Paraburkholderia caribensis: K788_0005096
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Entry
K788_0005096 CDS
T04141
Name
(GenBank) RNA polymerase sigma-70 factor
KO
K03088
RNA polymerase sigma-70 factor, ECF subfamily
Organism
bcai
Paraburkholderia caribensis
Brite
KEGG Orthology (KO) [BR:
bcai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bcai03021
]
K788_0005096
Transcription machinery [BR:
bcai03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
K788_0005096
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4_2
Sigma70_r4
Sigma70_ECF
DUF1804
Motif
Other DBs
NCBI-ProteinID:
ALL69416
UniProt:
A0A0P0RKQ7
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All DBs
Position
unnamed:complement(40996..41535)
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AA seq
179 aa
AA seq
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MGHDDLDRLLSAVALRDRVAFETLYRRTSPKIFAICIKVLRDRSEAEDTLQDVYVTAWNQ
AATFNPQLSSAITWLGTIARNRAIDRIRRRRTVSLDETTVEEIVDESPTPAALAQLSQER
QRLELCLQALPEIQRKAIREAFFTGSSYAELAARMRVPLGTMKSWIRRSLMQLKTCLER
NT seq
540 nt
NT seq
+upstream
nt +downstream
nt
gtggggcacgacgatctggatcgcttgctatcggctgttgcgttgcgcgaccgggttgcg
ttcgaaacgctctatcgtcgtacgtctccaaagatattcgccatttgcatcaaggtactg
cgtgaccggtccgaagccgaagacacgcttcaggatgtgtacgtcaccgcctggaaccag
gcggccacattcaatccgcagttatcgagcgccatcacctggctcggcacgatcgcacgc
aatcgcgcaatcgatcgcatcaggcgccgccgcacggtctcgcttgacgaaacaacggtc
gaagagatcgtcgacgaatcgcccactcccgctgcccttgctcaactcagccaggaacgc
cagcggctcgaattgtgtctgcaagcgctgcccgagattcagagaaaggcgatcagggag
gcattcttcacgggttcgtcgtacgccgaactggccgcgcgaatgcgtgttccgctgggc
accatgaaaagctggattcgccgcagtctgatgcagctgaagacgtgtcttgaacgatga
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