Borreliella carolinensis: QIA18_01460
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Entry
QIA18_01460 CDS
T09353
Name
(GenBank) HU family DNA-binding protein
KO
K05788
integration host factor subunit beta
Organism
bcaz
Borreliella carolinensis
Brite
KEGG Orthology (KO) [BR:
bcaz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bcaz03032
]
QIA18_01460
03036 Chromosome and associated proteins [BR:
bcaz03036
]
QIA18_01460
03400 DNA repair and recombination proteins [BR:
bcaz03400
]
QIA18_01460
DNA replication proteins [BR:
bcaz03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
QIA18_01460
Chromosome and associated proteins [BR:
bcaz03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
QIA18_01460
DNA repair and recombination proteins [BR:
bcaz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
QIA18_01460
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_1
DEK_C
HU-CCDC81_bac_2
Motif
Other DBs
NCBI-ProteinID:
WKC90628
LinkDB
All DBs
Position
complement(236885..237211)
Genome browser
AA seq
108 aa
AA seq
DB search
MSFSRRPKVTKSDIVDQISLNIRNNNLKLEKKYIRLVIDAFFEELKSNLCSNNVIEFRSF
GTFEVRKRKGRLNARNPQTGEYVKVLDHHVAYFRPGKDLKERVWSIKG
NT seq
327 nt
NT seq
+upstream
nt +downstream
nt
atgtctttttcaagaagaccaaaggttactaagtcagatattgttgatcaaatatcttta
aatattagaaataataatctaaagttagaaaaaaaatacataagacttgtaatagatgct
ttttttgaagagcttaaaagtaatctttgttcgaataatgttattgagtttaggtctttt
ggtacatttgaagttagaaaaagaaaggggcgtttaaatgctcgcaatcctcaaacaggg
gaatatgttaaggttttggatcatcatgttgcttattttcgtccaggcaaggacttgaaa
gagagagtgtggagtattaaaggttaa
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