Bacillus cereus ATCC 14579: BC4403
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Entry
BC4403 CDS
T00127
Name
(GenBank) Single-stranded-DNA-specific exonuclease recJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
bce
Bacillus cereus ATCC 14579
Pathway
bce03410
Base excision repair
bce03430
Mismatch repair
bce03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bce00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
BC4403
03430 Mismatch repair
BC4403
03440 Homologous recombination
BC4403
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bce03400
]
BC4403
DNA repair and recombination proteins [BR:
bce03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
BC4403
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
BC4403
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
BC4403
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ssDNA-exonuc_C
RecJ_OB
DHH
DHHA1
PhoU
DUF6324
DUF5368
Motif
Other DBs
NCBI-ProteinID:
AAP11316
UniProt:
Q817X2
LinkDB
All DBs
Position
complement(4343306..4345645)
Genome browser
AA seq
779 aa
AA seq
DB search
MLQPKTRWKEKEYNDERVSELASKLQLSPLVVSLFLGRGLDTEDKILDFLNTENQEFHDP
FLLEGMDRTGERVNKAIQNGEQILIFGDYDADGVSSTTVLYLALQELGAEVEFYIPNRFT
EGYGPNEEAFRWAHSAGVSLIITVDTGIAAVHEANVAKELGIDLIITDHHEPPPELPEAL
AIIHPKLDGGVYPFHYLAGVGVAFKVAHALLGRVPEHLLEIAVIGTVADLVSLHGENRLL
VKRGLKHMRMTRNIGLKALFKVANVSQSEITEESIGFSIAPRINAVGRLEDAAPAVHLLL
SDDPEEAKELAEEIDELNKLRKDIVKQITEEAIAEVENNFPPEENKVLVLAKEGWNPGVI
GIVASKLVERFYRPTIVLSIDPIKETAKGSARSIAGFDLFANLSDCRELLPHFGGHPMAA
GMTLHMNDVDELRRRLNEQADAILTEEDFIPITAVDVFCKVEDVTLAAIEDMQKLAPFGV
GNPKPRIAVKDAELESIRAIGSDGSHLKMALRDGQATLDTIGFGFGAYAKEISPVAKVSV
IGEASINEWNNFKKPQLMVQDIAVEAWQLFDWRSMRNAEANLAELPKEKITMVYFSEEVL
NKFSLESYKEKLMHASEVTHLDDQYIVLLDLPKGTDELRELFKVGFPARIYTLFYQENNH
LFSTVPTREHFKWYYSFLSQKTPFSLRQYGEQLCRHKGWSKDTVNFMTQVFFELEFVTIK
DGVIFMADKKQKRDLIESNTYREKMNHLQLEKELVYSTYQQLYTWFETIRNHKEVEQLG
NT seq
2340 nt
NT seq
+upstream
nt +downstream
nt
gtgttacaaccgaagacgcgttggaaagaaaaagaatataatgacgagcgagtgagtgaa
ttagcaagtaaattacagttatcgccacttgtcgtttcgttattcctcggtagaggactc
gatacagaagataagattttagattttttaaatacagaaaatcaagaatttcatgatcca
tttttattagaaggaatggatagaacgggagaacgtgtaaataaggcgattcaaaatgga
gagcaaatattaatatttggtgattacgatgcggacggagtaagtagtacgacagtttta
tatcttgctcttcaagaattaggtgcagaagtagaattttacattccaaatcgttttaca
gaagggtatggaccgaacgaagaagcatttcgttgggcgcatagcgcaggggtctcgcta
attattactgtcgatactggtattgcagcggtacatgaagcgaatgtagcgaaagagctt
ggaatagatctaattattacagatcaccatgagccaccgccagaattgccagaagcactt
gcgattatacatccgaaattagatggcggtgtatatccgtttcactatttagctggtgta
ggtgttgcgtttaaagttgcgcatgcactattaggccgtgtaccagaacatttattagag
atcgcagtaattggtacagtagccgatttagtatcacttcatggtgaaaataggttgcta
gtgaaacgcggtttaaaacatatgcgtatgacgagaaatattggtttgaaggcattgttt
aaagttgctaacgtttcgcaaagtgaaattaccgaagagagtattggtttctcaattgca
cctcgtattaatgcggttgggcgtttagaagatgctgcgccggctgtacaccttttatta
tcagatgatccagaggaagcgaaagagctagctgaagaaattgatgagctgaacaaactg
cgaaaagatattgtaaagcaaattacagaagaggctatcgctgaagtggaaaataacttc
ccaccagaagaaaataaagtattagtacttgcgaaagaaggctggaacccaggggtaatt
ggaattgttgcttcgaaattagttgaacgtttttatcgtccgacgattgtattaagcatt
gatcctataaaagaaacagcaaaaggctcagcacgtagtattgcaggatttgatttgttt
gcaaatttatcagattgtagagagttattaccacacttcggagggcatccgatggcagcg
ggaatgacgctacatatgaatgatgtagatgaattacgtcgccgcttaaatgaacaagca
gatgcaattttaacagaagaagattttattccaattacagcagttgatgttttttgtaaa
gtagaggatgtaacgctagcggcaattgaagatatgcaaaaactagccccgtttggtgtt
ggaaatccgaaaccacgtattgcagtaaaagatgcagagttagaaagcattcgcgcaatc
ggatcagatggctctcatttaaaaatggctcttcgtgatggacaagcaacactggataca
attggatttggctttggtgcatatgcgaaagaaatctctccagttgcaaaagtatctgta
ataggagaagcgtctattaatgaatggaataactttaagaagccacaactaatggtacaa
gatattgctgtagaggcgtggcaattatttgattggcgtagtatgcgtaatgcagaagca
aatttagcagaacttccgaaagaaaaaataacaatggtgtatttttctgaagaggtattg
aataaattttctttagagagctataaagaaaagctcatgcatgcttcagaagtaacgcat
ttagatgatcaatatatcgtgttacttgatttaccaaaaggaacagatgaattacgtgag
ctatttaaggtaggattcccagcgcgaatttatacgctattttatcaagagaataaccac
ttatttagtacagttccgacgagagaacactttaaatggtactattctttcttaagccaa
aaaacaccattttctttaagacaatatggagaacaactatgtcgtcataaaggttggtca
aaagatacagtaaatttcatgacacaggtgttttttgagttagaatttgttacaataaaa
gatggcgtcatttttatggcagacaaaaaacaaaagcgtgatttaattgaatcgaacaca
tatcgtgagaaaatgaaccacttacaattagaaaaagaattggtttatagcacatatcag
caactatatacatggtttgaaacgattcgtaatcataaagaagtagaacagttagggtaa
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integrated database retrieval system
