Burkholderia cenocepacia DDS 22E-1: DM39_4271
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Entry
DM39_4271 CDS
T03308
Symbol
xseB
Name
(GenBank) exodeoxyribonuclease VII, small subunit
KO
K03602
exodeoxyribonuclease VII small subunit [EC:
3.1.11.6
]
Organism
bcen
Burkholderia cenocepacia DDS 22E-1
Pathway
bcen03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bcen00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
DM39_4271 (xseB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bcen03400
]
DM39_4271 (xseB)
Enzymes [BR:
bcen01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
DM39_4271 (xseB)
DNA repair and recombination proteins [BR:
bcen03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
DM39_4271 (xseB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_S
TetR_C_1
Motif
Other DBs
NCBI-ProteinID:
AIO34938
UniProt:
A0A088UCI2
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All DBs
Position
2:complement(1037435..1037716)
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AA seq
93 aa
AA seq
DB search
MAKTASPGATLPGTDAEPLPDNYEAALAELETLVARMEGGALSLEDSLAAYRRGAALVAF
CQQQLEKVEQQVRVLDGATLKPAAATDGEDDDL
NT seq
282 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaaaccgcatccccaggcgcgacactgcccggcaccgacgccgaaccgttgccg
gacaattacgaagcggcgcttgcggagctcgagacgctggttgcccggatggaaggcggc
gcgctgagcctcgaggattcgctggcagcgtatcgccgcggcgcggcccttgttgcgttt
tgccaacagcagctcgaaaaggtggagcagcaggttcgcgtgctcgacggcgcgacgctg
aaacccgcggccgccacggacggcgaagacgacgatctatga
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