Bifidobacterium choerinum: BcFMB_03860
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Entry
BcFMB_03860 CDS
T05748
Name
(GenBank) hypothetical protein
Organism
bcho
Bifidobacterium choerinum
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SpaA
Big_2
HL_N-beta
ig
Gram_pos_anchor
Invasin_D4
Motif
Other DBs
NCBI-ProteinID:
ATU20206
UniProt:
A0A2D3D5S0
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All DBs
Position
1015365..1018316
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AA seq
983 aa
AA seq
DB search
MIGSILVPRGSFEDHVTTNGRVWVGLDFMMYNPTKAVDFPAGIGEGASSSVIDMDQERHN
FPWKGSLRSECSAIAWNKTDESGNLLGGSTWGVYKSVQDAIKEENALYPAVKDNDIPSGD
WNPKDGEFRVGSLQPNARYYIKEMTAPEGYVKSDLIYVIKTTEKGSVSNKDIIAVYNTDG
TANTDSNSWKLTDVVGGESGTKGIANTRKGGSVQWGKYADGDNSHKGLAGSEWTLTKTGE
GGWSQLITDNTKAVESVSLYKDNQAVGESMTVTEGETFNLTAKVMPEDATQDVNWSSSDP
DAVEVQDGHITVRHTPTNGQTVVITATTVDTNASGDRIEAHVTLTIQETALQELTLQYNG
QTAPSEISATVGNKLTLTATATPATLNNSITWESTDTSVATVDRGVVTPLKAGETTIWAK
CKSDRSKWKSVVIKVNEAVDPNATVIYFNPKSTVSYSGTPYIYYGVDGSSWISEPVQMTP
YCGDWYAYTISLDKKKVSFYFTKSTDKNSKLYTATNNTNFAVGPNVSSAVVVNYETITTG
GKPTCPTSRAAAAPQTTAVQNTTVSVEEADAAASLQVFRRARLQARGTTAEQPTYKDSNF
AVGQFTILNLPAGTYTLKETTAPDGYYLNPTEYTFTIDDTGKVTWTGGRTPSLVGDMGWI
ADVPTEFSWDKIDAGYEGNESENGPLVGTKWRLEKFKAAATEGGDGVYETNIAEIEDCNT
ELATDCVGNDQDPTGGSFTLKKLTAGKYRLVETYAPTGYEVPENVYYYFELGAQAPDTAV
TWNKGTLDTWDKQTGSFTGTSEKSVNGNVVPNYRETGSVNWSKVNSENANQFLRGSEWKV
RFKAEAAENFSEWYQVLDCATTPAQCAVPGKPDNQPTWTYDHHPSAGVFQMQNLQWGDYE
LVETKAPDGFYPSDKTYTFTVSKDNVEKNIAIQGAENGNKIPNTPGFELPSTGGEGNTLI
VMFGFALTAISMLGYAIAMRKRV
NT seq
2952 nt
NT seq
+upstream
nt +downstream
nt
atgattggctcgattctcgtgccgcgcggttcgttcgaggaccatgtcactaccaacggt
cgtgtttgggttggtctggacttcatgatgtacaatccaacaaaggctgtggattttcct
gccggtatcggtgaaggcgcgtcgtcgtcggtcatcgatatggatcaggagcgtcacaac
ttcccgtggaagggctcgctgcgcagcgaatgctccgcgattgcttggaacaagaccgat
gaaagcggcaatctgctcggtggctccacttggggtgtctacaagagcgttcaggacgcg
atcaaagaggagaacgcgctgtatccggccgtcaaggacaacgacattccttccggcgac
tggaatcccaaggacggcgagttccgtgtgggctcgctgcagccgaacgctcgttactac
atcaaggagatgacggcgccggaaggctatgtgaaatctgacttgatttacgtcatcaaa
acgacggaaaagggttcggtctcgaataaggacatcattgccgtctataacaccgatggt
actgcaaacacagattcgaactcgtggaagttgaccgatgtcgtcggtggcgagtctgga
acgaagggtattgccaatacgcgcaagggcggaagcgtccagtggggtaagtatgccgac
ggcgacaattcccacaagggtcttgccggttccgaatggacgctgacgaagaccggtgaa
ggcggctggtcgcagctcatcaccgacaacacgaaggccgtggaaagtgtgtccctctat
aaggacaaccaggccgtcggagagtcgatgacggtgaccgagggggaaaccttcaacctt
accgccaaggtcatgcctgaggatgctacgcaggacgtcaactggtcctcttcggatcct
gacgccgtcgaggtgcaggatggccacatcactgtccgccacacgccaacgaatggacag
actgtcgtcatcacggcgacgactgtcgacaccaacgccagcggcgatcgtattgaggcg
catgttacgctgactattcaggaaaccgcgctgcaggaactgacgctgcagtacaacggc
cagaccgcgccgtctgagatttccgcaaccgtcggcaacaagcttacgttgactgccacg
gctaccccggcgacgctgaacaacagcatcacttgggaatccacggatacctctgttgcg
actgtggacaggggcgttgttacgccgcttaaagccggagagacgaccatttgggccaag
tgcaagagcgaccggagcaagtggaagtccgttgtcatcaaggtcaatgaggcggtggac
ccgaatgcgaccgtcatctacttcaacccgaagagcacggtaagttatagcggcacaccg
tacatttactatggggtcgatggaagctcttggattagcgaaccagtacagatgacgccg
tactgcggcgactggtatgcctacacgatttctttggacaagaagaaggtgagcttctac
ttcacgaagtctacggacaagaatagtaagctgtatacggcaacgaacaatactaacttt
gcggtgggccccaacgtctccagcgcagtagtggtcaactatgagaccatcactacgggt
ggcaagcccacctgcccgacatctcgtgccgctgcggcacctcagacgactgccgtgcag
aatacgacggtttccgtcgaagaggccgacgccgccgcatcgctgcaggtcttccgcagg
gcgcgtctgcaggcgcgtgggaccacggccgaacagccgacctacaaggattccaacttc
gccgtcggtcagttcacgattctgaacctcccggcgggcacctacacgctcaaggagacg
acggcgccggacggatactacctgaacccgaccgagtatacgttcacgatcgatgacacg
ggcaaggtcacttggacgggcggtaggacgccttcccttgtaggcgacatgggctggatc
gccgatgtgccgaccgagttcagctgggacaagattgatgccggatacgaaggtaacgag
tcggagaacggtccacttgttggcaccaagtggcgtcttgagaagttcaaagcagctgcg
accgaaggcggtgacggtgtctacgagaccaatattgccgagatcgaggattgcaatacc
gaacttgcaactgactgcgtcggtaatgaccaggatcctactggaggtagcttcacgctg
aagaagctgacggctggcaagtatcgtctcgttgagacgtatgcgcctaccggctacgag
gttccggagaacgtctattactacttcgagctgggtgcgcaggctccggataccgcggtg
acctggaacaagggcacgctggatacctgggacaagcagaccggttccttcaccggcact
agtgaaaaatctgtgaacggtaacgtcgttccgaactatcgcgagaccggcagtgtaaac
tggagtaaggttaattccgaaaacgccaatcagttccttcggggctccgaatggaaggtg
aggttcaaggctgaggctgcagaaaacttctctgagtggtatcaggttctcgactgcgcg
actactccagctcagtgtgccgttcccggaaagccggataatcagccgacttggacttat
gatcatcatccgagtgccggcgtattccagatgcagaacctgcagtggggagactatgag
ctcgttgagacgaaggcccctgatggtttttatccgtccgacaagacctacacgttcact
gtgtccaaagacaatgtggagaagaacatcgccattcagggtgcggaaaacggcaacaag
attccgaacacgccgggctttgagctgccttctacgggcggtgagggcaacacgctgatt
gtgatgttcgggtttgcgctcacagcgatatcgatgctaggctatgcgatagcgatgcgg
aaacgcgtctaa
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