Heyndrickxia coagulans 2-6: BCO26_1716
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Entry
BCO26_1716 CDS
T01527
Name
(GenBank) apurinic endonuclease Apn1
KO
K01151
deoxyribonuclease IV [EC:
3.1.21.2
]
Organism
bck
Heyndrickxia coagulans 2-6
Pathway
bck03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
bck00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
BCO26_1716
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bck03400
]
BCO26_1716
Enzymes [BR:
bck01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.2 deoxyribonuclease IV
BCO26_1716
DNA repair and recombination proteins [BR:
bck03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
BCO26_1716
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
Motif
Other DBs
NCBI-ProteinID:
AEH53775
UniProt:
F7YZ01
LinkDB
All DBs
Position
complement(1747542..1748441)
Genome browser
AA seq
299 aa
AA seq
DB search
MLKIGSHVSMSGKKMLLASSEEAVSYGANTFMIYTGAPQNTRRKKIEDLNIEAGLAHMKE
HGIEEIVVHAPYIINIGNTTNPATFELGVRFLQSEIERTEAIGAKQIVLHPGAHVGAGPE
KAIKKIIEGLNEVLVPGQTAQIALETMAGKGSECGRTFEELAEIIDGVKYNDKLSICFDT
CHTHDAGYDVKNRFDEVLDEFDRIIGIGRLKVLHVNDSKNEAGSHKDRHENIGFGHIGFE
ALDYIVHHPALSDIPKILETPYVGEDKKNRKPPYKYEIAMLRNREFDENLLAKIVEQPV
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atgcttaaaattggttcacatgtctcgatgagcggcaaaaaaatgctgcttgcgtcaagt
gaagaggcggtttcatacggcgccaacacatttatgatttataccggcgcaccgcaaaat
acaaggcggaagaaaattgaagacttgaacattgaagcaggccttgcccatatgaaagaa
catggcatagaggagattgtcgtccatgcgccgtatattatcaatatcggcaacacaaca
aatcctgcgacatttgaactcggtgtccgttttttgcagtcggaaattgagcggacggag
gcaatcggggcgaagcagatcgttttgcatccgggcgcccatgttggagcagggccggaa
aaagcgatcaagaaaatcattgaagggctgaatgaggtgctcgttccggggcaaaccgcc
cagattgcgcttgaaacgatggccggcaaaggatccgaatgcggcaggacgtttgaggaa
ctggcggaaatcatagacggcgtcaaatacaatgacaagctttccatttgctttgacact
tgccatacccatgatgccggctatgatgtgaaaaaccggtttgatgaagtgctggatgaa
tttgaccggatcatcggcatcggccgcctgaaagtactgcatgtcaatgacagcaaaaat
gaagccggctcgcacaaagaccggcatgagaatatcgggtttggccatatcggatttgaa
gcccttgactatatcgtgcatcacccggcgctttctgacatcccgaaaattttggaaacc
ccttatgtcggcgaagacaaaaagaaccgcaagccgccgtacaaatacgaaatcgccatg
cttagaaacagggaatttgacgaaaatctgctggccaaaattgtggaacagcccgtttga
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