Burkholderia orbicola: Bcenmc03_1187
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Entry
Bcenmc03_1187 CDS
T00669
Name
(GenBank) exodeoxyribonuclease V, gamma subunit
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
bcm
Burkholderia orbicola
Pathway
bcm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bcm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Bcenmc03_1187
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bcm03400
]
Bcenmc03_1187
Enzymes [BR:
bcm01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
Bcenmc03_1187
DNA repair and recombination proteins [BR:
bcm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Bcenmc03_1187
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
ACA90362
UniProt:
B1JYW2
LinkDB
All DBs
Position
1:1300875..1304213
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AA seq
1112 aa
AA seq
DB search
MLHLFYSNRHETLADALLEDLAAFPARNGPWAPQQVIVPSAALRRRLELDIAARNGVCAN
VEFTYLAQWLWAQIGRVLTVPARSPFAPDRLVWRCYRLFAQAADGAPWLASPRLAAYLSA
SDDAMRYELAHRVAAVLDHYLTYRPEWLAAWQAGESVLAGDAAPRGISDAARDDERWQAA
LWRALLAELSDSGTPPAHRFLVEARHLDADAVARADWPESVSVFALPTMPPLHVALLREL
SRWIDVRVYALNPCREFWFDIVTAAHAEALDAAGRRDYQEVGHPLLAEWGRQTQAQLHML
HELTESAASGDASRFVENPAPTWLARVQNAILELQPEVDIGDTPVERGIEVHVCHSLARQ
LEVLHDRLLAWFDADASLQPSDVLVAVADLAAAGPLIDAVFGTAGAGGARVPYRITGLPP
SQANPVARVLLDWLALPERQVGAPELVEWLRVDAVAARYDIDAAALETVQTWLAAAGARR
GLSPRASDDAAVPAPRHTFSDALARLFLGYAMPEGAAPIGAWLPIEAATGSEAELLGRLA
RFTDDLDGFARRLAESHTPRGWSELFADTLARFFDSGAAYADALAGVRDALDAMLAAMTE
GAPDEALPAAVVRAGLAAALDDPARGGVPWGGVTFSSLTSLRGLPYRVVCLLGMDDGVLP
SLARADEFDLMAVLPKLGDRQRRDDERNLFLDLLLAARDRLLIAYTGRSIRDNAPLPPAA
LVDELLDHLAIVTAGPGAAPDAVDAARRAFIVEHPLQPFAAAYFQLGSELVSYDAERATL
ASLLAAEASRGQPREQPFFAQPLPAEPVEPVAFSEFERFWRHPARALLRGRLGIVLTDAQ
AELLDTEPFALDFAGSDALAERVLPLLIEAGEGGVHDHALRIADASPELPGGATGAVWRD
QALGSMTQLASNVRRALADGIERRPFSLLVVPKWPDTEQALFGADDAMLAADAVSAPLEL
HGTLNRLTPAGQVIYRYARPSARDYLSAWLAHLVYCAIEPGGPRRTLWFGSGGAFELTPV
AAPLERLAPLAALFRAGRRMPLRFFPRSAWARVSDGEAKAASVWINERVVSEADDPAIAI
AWRGAHPSLDEPFGTLARLVFEPLVEHLKEVA
NT seq
3339 nt
NT seq
+upstream
nt +downstream
nt
atgctccatctcttctattcgaaccgtcacgaaacgctggccgacgcgctgctcgaggat
ctggctgcgttcccggcccgcaacggcccgtgggcgccgcaacaggtcatcgtgccgagc
gcggcgctgcgccgccgtctcgagctcgacatcgccgcgcgcaatggcgtgtgcgcgaac
gtcgagttcacctatctcgcgcagtggctgtgggcgcagatcggccgcgtgctgacggtg
ccggcgcgctcgccgttcgcacccgaccggctcgtgtggcgctgctaccggctgttcgcg
caggcggccgatggtgcgccgtggctcgcgtcgccgcggctcgccgcgtacctgtcggcc
tccgatgatgcgatgcgctacgaactggcccatcgcgtcgcggccgtgctcgatcattac
ctgacctatcgccccgaatggctggccgcgtggcaggccggcgaatcggtgctcgcgggc
gacgccgcgccgcgcgggatcagcgacgccgcgcgcgacgacgagcgctggcaggccgcg
ctgtggcgtgcgctgctcgccgagctgagcgacagcggcacgccgccggcacaccgcttc
ctcgtcgaagcgcgccatctcgatgccgacgcggtcgcgcgcgccgactggcccgaatcg
gtcagcgtgttcgcgctgccgacgatgccgccgctgcacgtcgcgctgttgcgcgaactg
tcgcgctggatcgacgtgcgcgtctacgcgctgaacccgtgccgcgaattctggttcgac
atcgtgaccgccgcgcatgccgaggcgctcgatgcggcagggcggcgcgactatcaggaa
gtcggtcatccgctgctcgccgaatggggccggcagacgcaggcgcaactgcacatgctg
cacgaactgaccgaaagcgccgcgtcaggcgatgcgtcgcgtttcgtcgagaatcccgcg
cccacctggctcgcgcgcgtgcagaacgcgatcctcgaattgcagccggaggtcgacatc
ggcgacacgccggtcgagcgggggatcgaggtgcatgtgtgccacagcctcgctcgccag
ctcgaggtgctgcacgaccggctgcttgcctggttcgacgccgatgcgagcctgcagccg
tccgacgtgcttgtcgcggtcgccgatctcgccgcggccgggccgctgatcgacgcggtg
ttcggcacggccggcgccggcggcgcgcgggtgccgtaccggatcaccggcctgccgccg
tcgcaggcgaacccggtcgcgcgcgtgctgctcgactggctcgcgttgccggaacggcag
gtcggcgcgccggagctggtcgaatggctgcgcgtggatgcggtggccgcgcgctacgac
atcgacgcggccgcgctcgaaaccgtgcagacctggctcgcggccgccggcgcgcggcgc
gggctgtcgccgcgcgcgagcgacgacgcggccgtgcccgcgccgcgccatacgttctcc
gatgcgctcgcgcgcctctttctcggctatgcgatgcccgaaggcgcggcgccgatcggc
gcgtggctgccgatcgaggcggccaccggcagcgaggccgaactgctcggccggctcgca
cgtttcaccgacgatctcgacggcttcgcgcggcggctcgccgagtcgcacacgccgcgc
ggctggagcgaactgtttgccgacacgctcgcgcgcttcttcgattcgggcgctgcgtat
gccgatgcgctggccggcgtgcgcgacgcgctcgacgcgatgctggccgcgatgacggaa
ggtgcgccggacgaggcgttgccggcggccgtcgtgcgcgcggggctcgccgcggcgctc
gacgatccggcccgcggcggggtgccgtggggtggcgtcacgttctcgtcgctgacgagc
ttgcgcgggctgccgtatcgcgtcgtctgcctgctcgggatggacgacggcgtgctgccg
agtctcgcgcgcgcggatgaattcgacctgatggccgtgctgccgaagctgggcgaccgg
cagcgtcgcgacgacgagcgcaatctgtttctcgacctgttgctcgccgcacgcgaccgc
ctgctgatcgcctatacgggccgcagcatccgcgacaatgcgccgttgccgcccgcggcg
ctcgtcgacgaactgctcgatcatctggcgatcgtcacggccgggcccggcgccgcaccg
gatgcggtcgatgccgcgcggcgcgcgttcatcgtcgaacatccgctgcaaccgttcgcg
gccgcgtacttccaactgggcagcgaactcgtttcgtacgatgccgagcgggcgacactc
gcgtcgctgctggccgccgaagcgtcgcgcggccagccgcgcgagcagccgttcttcgcg
cagccgctgccggccgagccggtcgagcccgtcgcgttcagcgagttcgaacgtttctgg
cggcatccggcgcgtgcgttgctgcgcggccggctcggcatcgtgctgaccgacgcgcag
gcggaactgctcgataccgagccattcgcgctggactttgccggtagcgacgcgctggcc
gagcgcgtgctgccgctcctgatcgaagcaggcgagggtggcgtgcacgatcacgcgctg
cgcattgcggacgcgagccccgaactgcccggcggcgcgacgggcgcggtgtggcgcgac
caggcgctcggttcgatgacgcagcttgcgtcgaacgtgcgccgtgcgctggccgatggc
atcgagcggcggccgttctcgctccttgtcgtaccgaagtggcccgacaccgagcaggcg
ctgttcggcgccgacgacgcgatgctggcggccgacgcggtgagcgcgccgctcgaattg
cacggcacgctgaaccggctgacgccggccgggcaggtcatctaccgctatgcgcggccg
agcgcgcgcgactacctgtccgcgtggctcgcgcatctcgtctactgtgcgatcgagccc
ggcggcccgcgccgcacgctgtggttcggcagcggcggtgcgttcgagctgacgcccgtc
gcggcgccgctcgaacggctcgcgccgctggccgcgctgtttcgcgcggggcggcgcatg
ccgctgcggtttttcccgcgcagtgcgtgggcgcgagtatccgacggcgaggccaaggcc
gcgagcgtgtggatcaacgaacgggtcgtgagcgaggccgacgatccggccatcgcgatc
gcatggcgcggcgcgcatccgtcgctcgacgagccgttcggcacgctcgcgcggctcgtg
ttcgagccgctcgtcgagcatctgaaggaggtcgcatga
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