Heyndrickxia coagulans DSM 1 = ATCC 7050: BF29_1549
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Entry
BF29_1549 CDS
T03712
Symbol
rumA
Name
(GenBank) 23S rRNA (uracil-5-)-methyltransferase RumA
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
bcoa
Heyndrickxia coagulans DSM 1 = ATCC 7050
Brite
KEGG Orthology (KO) [BR:
bcoa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
bcoa03009
]
BF29_1549 (rumA)
Enzymes [BR:
bcoa01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
BF29_1549 (rumA)
Ribosome biogenesis [BR:
bcoa03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
BF29_1549 (rumA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
TRAM
Methyltransf_31
MTS
Methyltransf_25
Methyltransf_15
Methyltransf_12
Methyltransf_11
Motif
Other DBs
NCBI-ProteinID:
AJH79068
LinkDB
All DBs
Position
complement(1496884..1498260)
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AA seq
458 aa
AA seq
DB search
MQKEAIIKPKQQFPLTIKRLGINGEGVGYFKRTVVFVPGALPGEEVVVEAKRIHPKYVEG
IAKKVRKRSPHRVKPPCPVYEQCGGCQLQHLAYKQQLIEKRDIVIQALERHTKLKVDELD
IRPTIGMDNPWIYRNKSQFQLGEDHGKIISGLYSLDSHRLINVPECIVQHPLTNKVTQVV
TQILNDFHVPVYNEKTGKGIVRTIVTRVGTQTGQAQVVLITARRELPRKDFILSEIKKRL
PEVVSVAQNVNAKKTSVIFGDETIHLSGKEIIEERLEEFTYELSARAFFQLNPIQTVKLY
NEVKNAAALTGKEKIADAYCGVGTIGLWLADGASEIRGMDVIPEAIEDARKNAAAHNIPN
AHYFAGKAEVLLPKWLDEGWRPDVVIVDPPRSGCDEALLRTILKVKPKKFIYVSCNPSTL
AKDLHILSKAYDVAYMQPVDMFPQTAHVECVANLELKL
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaaagaagccatcattaaaccaaaacagcaatttcccttgacgatcaaacggctc
ggcatcaacggggaaggggtcggctattttaagcggacggtcgttttcgtgccaggtgca
ctgccgggcgaagaggtggtcgttgaagcaaaacggatacacccgaaatacgtggagggc
attgccaaaaaggtgcgaaaacgctcgccccaccgggtaaaacccccgtgcccggtttac
gagcagtgcggcggctgccagctccagcaccttgcgtacaagcagcagcttatcgaaaaa
cgcgacattgtcatccaggcgcttgaacgccatacaaagttaaaagtagacgaactcgat
atccgcccgacgattggcatggataacccgtggatttaccggaacaaaagccagttccag
ctcggcgaagaccatgggaaaattatttccggcctctacagcctcgattcccaccggctg
atcaacgtgccggaatgcattgtccagcatccgctgacaaacaaagtgacacaagtggtg
acacaaattttaaatgattttcatgtcccggtgtataatgaaaaaaccgggaaaggcatc
gtgcggacaattgtcacaagggtaggcacccagaccggccaggcccaggttgtgctgatt
acggccaggcgggagctgccgcgcaaagatttcatcctttctgagatcaaaaagcgcctg
ccggaagtcgtatcggttgcgcaaaatgtgaacgccaaaaaaacgtcggttattttcggc
gacgaaacgattcatttatccggaaaagaaattattgaagaacggctcgaagaattcaca
tacgaactctccgcccgcgcctttttccagctgaacccgatccagacggtgaagctttac
aatgaagtgaaaaacgccgctgcgttgaccggcaaggagaaaattgcggatgcttactgc
ggtgtcggcaccattggcttgtggctcgcggacggcgcatctgaaatccgtggcatggat
gtgattccggaagcgattgaagatgccagaaaaaacgccgccgcccacaacatcccgaac
gcccattactttgccggcaaagcggaagtcctcctgccgaaatggctggacgaaggatgg
cgcccggacgttgtcattgtcgacccgccgcgttcgggctgtgacgaagccctcttacgt
acaattttaaaggtgaagccgaagaagtttatatatgtttcatgcaacccttccactttg
gcgaaggacttgcacatattgagcaaggcttatgacgtagcgtacatgcagcctgtggat
atgttcccgcaaacggcgcatgtggagtgtgtggcgaatctggagctgaaattgtga
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