Heyndrickxia coagulans DSM 1 = ATCC 7050: BF29_2399
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Entry
BF29_2399 CDS
T03712
Symbol
sigH
Name
(GenBank) RNA polymerase sigma-H factor
KO
K27000
RNA polymerase sigma-H factor
Organism
bcoa
Heyndrickxia coagulans DSM 1 = ATCC 7050
Brite
KEGG Orthology (KO) [BR:
bcoa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bcoa03021
]
BF29_2399 (sigH)
Transcription machinery [BR:
bcoa03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
BF29_2399 (sigH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4_2
GerE
HTH_23
HTH_38
HTH_16
HTH_29
Sigma70_r3
HTH_28
HTH_30
Sigma70_r4
Sigma70_ECF
Terminase_5
UPF0122
HTH_Tnp_Tc3_1
COG4_N
HTH_36
Motif
Other DBs
NCBI-ProteinID:
AJH79323
LinkDB
All DBs
Position
2321391..2321996
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AA seq
201 aa
AA seq
DB search
MQDEELVERIHNGESEALDYLIQKYRNFVRAKARSYFIIGADREDIIQEGMIGLYKAIRD
YREDKLTSFRAFAELCINRQMITAIKTATRQKHIPLNSYISLDKPIYDEESDRTLMDVIT
GAKISNPEELILIREKYVRIEVKISELLSDLERKVLALYLDGQSYQEISEELNRHVKSID
NALQRVKKKLERLLERRELTY
NT seq
606 nt
NT seq
+upstream
nt +downstream
nt
atgcaggacgaagagttggttgaacggatacacaacggcgaaagcgaagcgctggattac
ttgatccaaaaatacagaaactttgtcagggcaaaagcgcgttcttactttatcatcggg
gccgaccgcgaggatattatccaggaaggcatgatcggtctgtataaggccatacgcgac
tacagagaggacaagctcacgtctttcagggcttttgctgaattatgcatcaaccggcaa
atgattaccgcaattaagactgccacccgccaaaagcacataccgcttaattcttacatt
tccctggacaagccaatttatgatgaagaatccgaccgtacgttgatggatgtcatcacc
ggcgcgaaaatttccaatcctgaagaattgattttaatccgcgaaaaatatgtccgtata
gaagtaaaaatatccgagctgttaagcgatctggaaagaaaagtgctcgccctttacctg
gacgggcagtcctaccaggaaatttcagaagaattgaaccgccatgtaaaatcaattgat
aacgctttacaacgcgtcaaaaagaagctggagcgcctgttggaaaggagggagctgaca
tactga
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