Bradyrhizobium commune: IC761_04000
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Entry
IC761_04000 CDS
T09283
Symbol
hrpB
Name
(GenBank) ATP-dependent helicase HrpB
KO
K03579
ATP-dependent RNA helicase HrpB [EC:
5.6.2.6
]
Organism
bcou
Bradyrhizobium commune
Brite
KEGG Orthology (KO) [BR:
bcou00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bcou03019
]
IC761_04000 (hrpB)
Enzymes [BR:
bcou01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
IC761_04000 (hrpB)
Messenger RNA biogenesis [BR:
bcou03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
IC761_04000 (hrpB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HrpB_C
Helicase_C
DEAD
Flavi_DEAD
ResIII
AAA_30
HA2_C
HA2_N
AAA_19
Motif
Other DBs
NCBI-ProteinID:
QPF92470
UniProt:
A0A7S9H179
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All DBs
Position
845983..848457
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AA seq
824 aa
AA seq
DB search
MPRSFDTPLPIDAVLDDLSRTLEARNAAVLVAPPGAGKTTRVPLALLDAPWARGKKIIVL
EPRRIAARASADRMAKSLGERAGETVGYRVRFGSKISRTTRIEVVTEGIFTRQILDDPEL
SGIAAILFDEFHERSLDADLGLALARDAQTGLREDLRILVMSATLDGARVAKLLGEAPVV
ESEGRAFPVETRYLGRKADAPIERQMADAIASALRVDSGSVLAFLPGAAEIRRTQNFLVE
RVQDASIEIVPLFGALDAAVQDRAIAPAPKGTRKVVLATSIAETSLTIEGVRIVVDSGLA
RVPRYEPDIGLTRLETVRAARAAVDQRRGRAGRTEPGVCYRLWDEPQTASLAPYTQPEIL
SADLSSLVLDLAQWGVADPAALSFLDPPPQPAWKEAKSLLSELNALDGDGRITAEGKSLR
ALALPPRLARMIVDSHRAGAGEDAAEIAAILTERGLGGDSADLEHRRDQFRRDRSPRAAS
ARDLVRRWASQVAASEKAGPQEDLSTGLMLAYAFPDRVARNRGNGSFVLANGRGAAVEQT
SSLARAPYIAIGEMTGTAASGRILLAAPLGEDDIERHFAEHIEAVDEISFDRGAMSLRAR
RKRTLHAITLSEATLAVSPSEDTARILADGLIAAGLDRLPWSKTAKQWRDRVMFLRKAEG
DSWPDLSDGGLIARRDDWLVPALYDKIALKDISAGDLSDALMALLPWEMRARLDREAPTH
FEAPTGSALAIDYEAEQGPTIAVRLQELFGLNTHPSIAAGKVPLVLELLSPAQRPVQVTR
DLPGFWRGSYAAVRSDLRGRYPRHPWPDDPASALPTRRAKPRGT
NT seq
2475 nt
NT seq
+upstream
nt +downstream
nt
ttgccccgcagcttcgacacgccccttccgatcgatgccgtgctcgacgatttgtcgcgc
acgctggaggcgcgcaacgccgccgtgctggtggcgccgcccggggccggcaagaccacg
cgcgtgccactcgcgcttttggacgcaccctgggccaggggcaagaagatcatcgtgctg
gagccgcggcgcatcgcggcccgcgccagcgccgaccgtatggcaaagtcgctcggcgag
cgcgccggcgaaaccgtcggctaccgcgttcgctttggttcaaaaatttcgcgcacaacg
cgcatcgaggtggtgaccgagggcatcttcacccgccagatcctcgacgatcccgagctc
tccggcattgccgcgatcctgttcgacgaattccacgagcgctcgctcgatgccgatctc
ggccttgcgctggcgcgtgacgcgcaaacgggtctgcgcgaggacctccgcattctcgtg
atgtcggccacgctcgacggtgcccgcgtcgcaaagctgctcggcgaggcgcctgtcgtc
gagagcgagggccgcgcgtttcccgtcgagacgcgctatctcggtcgcaaggcggatgcg
ccaatcgagcggcagatggcggatgcaatcgcctccgcgctgcgcgtcgacagcggctcg
gtgctggcgttcctgccgggcgcggccgaaatccgccgaactcagaatttcctcgttgag
cgcgtgcaggatgccagtatcgaaatcgtgccgctgttcggtgcgctcgatgccgccgtg
caggaccgcgccatcgcgccggccccgaagggcacgcgaaaagtggtgctggcgacatcg
atcgcggagacctcgctgaccatcgaaggcgtccgcatcgtggtcgattccggtctcgcc
cgcgtaccgcgctatgagcccgacattggcctgacccgtctcgagacggtgcgtgccgcg
cgcgcggcggtggaccagcgccgtggccgcgccggacgcaccgagcccggtgtctgctac
cggctctgggacgagccgcagacggcctcgctcgcgccttacacccagccggagattctc
agcgccgatctgtcgtcgcttgtgctcgatctcgcgcaatggggtgtggctgatcccgca
gcgctgtcgttcctcgatccgccgccgcagccggcctggaaggaagccaaaagcctgctg
tccgagctcaacgcgctcgatggcgacggccgcatcacggcggaaggcaagagcctgcgc
gcgttggcgctgccgccgcggctggcgcgcatgatcgtggattcgcatcgcgccggcgcg
ggcgaggacgccgccgagatcgctgccatcctcaccgagcgcgggctcggcggcgacagc
gccgatctcgagcacaggcgtgaccagttccgccgcgaccgttcgccgcgggccgcgagc
gcgcgcgacctggtgcgccgttgggcgtcacaggtggcggcgtccgagaaagcagggccg
caggaagatctctcgaccggcctgatgctcgcttatgccttcccggaccgagtcgcgcgc
aatcgcggcaatggcagctttgtgctcgccaacggccgaggcgccgcggtggagcagacc
tcgtcgctcgcccgtgcgccctatatcgcgatcggcgagatgacgggaacggcggcaagc
gggcgtatcctgctcgccgcgccgctcggcgaggacgacatcgagcggcattttgccgag
catatcgaggcggtcgacgagatttccttcgaccgcggtgcgatgtcgctgcgtgcgcgg
cgcaagcgcacgctgcatgcgatcacgctctccgaggccacacttgcggtgtcgccctcg
gaggacaccgcacgtatcctcgccgacggtctcattgccgcaggcctcgaccgtctgccc
tggtcgaagaccgcaaaacaatggcgcgaccgcgtgatgttcctgcgcaaggccgaaggc
gacagctggcccgacctttcggacggcggattgatcgcgcggcgcgacgactggctggtg
ccggcgctctacgacaagattgcgctgaaggatatctcggccggcgatctctccgacgcg
ctgatggcgctattgccgtgggagatgcgcgcgcggctcgatcgcgaagcgccgacgcac
ttcgaggcgccgaccggtagcgcgctcgcgatcgactatgaggccgagcaggggccgacc
atcgcggtgcggctccaggaattgttcgggctcaacacccatccatcgatcgcggccggc
aaggtgccgctggtgctggagctgctgtcgccggcgcagcgtccggtgcaggtgacgcgc
gatcttcccggtttctggcgcggcagctacgcggccgtccgctccgacctgcgcggccgc
tacccgcgccatccctggccggacgatccggcgagcgcgctgccgacccgccgggccaag
ccgcgcggcacctga
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