Cytobacillus dafuensis: FSZ17_13980
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Entry
FSZ17_13980 CDS
T06982
Name
(GenBank) Ku protein
KO
K10979
DNA end-binding protein Ku
Organism
bda
Cytobacillus dafuensis
Pathway
bda03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
bda00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
FSZ17_13980
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bda03400
]
FSZ17_13980
DNA repair and recombination proteins [BR:
bda03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
FSZ17_13980
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ku
VTC
DUF4589
Motif
Other DBs
NCBI-ProteinID:
QED48258
UniProt:
A0A5B8Z5Q8
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All DBs
Position
complement(2950984..2951817)
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AA seq
277 aa
AA seq
DB search
MHTMWKGSISFGLVNIPIKLHAATEDKDIKLRNLHKECHSPIKYEKMCPVCNMEIKNEDI
VKAYEYTKGKFVVLENEDLEKLKKENEDKAVEIMDFVKMDQIDPIYYDRTYYMSPGDGGG
KAYSLLRKALKESEKVGLAKIIIRSKEQLAVLRVYENTLVMETIHYPDEVRKSEDVPNVP
TEDKVTKKEIDTAILLIDQLTSDFEPEKYTDDYRTALLELIDSKRTGKEIVTPVEKEPTT
NVTDLMAALQASIDKTKPKKKAAKKKRTTATKAKKEA
NT seq
834 nt
NT seq
+upstream
nt +downstream
nt
atgcatacaatgtggaaaggaagcattagctttggcctagttaatatccccattaagctt
catgctgctacagaggacaaggatattaagctgagaaatcttcataaagaatgtcattcc
ccgattaaatacgaaaaaatgtgccctgtatgcaatatggaaattaaaaatgaggatatt
gtaaaggcgtacgaatataccaaaggaaaatttgttgtcctagagaatgaggatttggaa
aaattaaaaaaggaaaatgaagataaggcagttgaaataatggattttgtaaaaatggat
caaattgacccgatctattatgatcgaacatactatatgtctcctggcgatggcggaggg
aaagcttattcgttattacgtaaagcattaaaagaatcagaaaaagtgggattagcaaaa
attattattcgttctaaggaacagcttgctgttcttcgtgtttatgagaataccttggtt
atggagaccattcattaccctgatgaggttcgaaaatctgaagatgtacctaatgttcca
actgaagataaggtaacgaaaaaagaaattgatacagccattcttttaattgaccaatta
acatcagattttgagcctgaaaagtatacagatgattatcgtactgccttattagagctt
attgattcgaagcgtactggcaaggagattgttaccccagtagaaaaagagcctacaacg
aatgtgaccgatttaatggcagccctacaagcatccattgataaaacgaaaccaaaaaag
aaagcagcaaaaaagaaaagaaccactgcaacaaaagccaaaaaggaagcatag
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