KEGG   Bdellovibrio sp. NC01: DOE51_16035
Entry
DOE51_16035       CDS       T06360                                 
Name
(GenBank) exonuclease
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
bdc  Bdellovibrio sp. NC01
Pathway
bdc03030  DNA replication
bdc03430  Mismatch repair
bdc03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:bdc00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    DOE51_16035
   03430 Mismatch repair
    DOE51_16035
   03440 Homologous recombination
    DOE51_16035
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:bdc03032]
    DOE51_16035
   03400 DNA repair and recombination proteins [BR:bdc03400]
    DOE51_16035
Enzymes [BR:bdc01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     DOE51_16035
DNA replication proteins [BR:bdc03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     DOE51_16035
DNA repair and recombination proteins [BR:bdc03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     DOE51_16035
SSDB
Motif
Pfam: RNase_T WYL
Other DBs
NCBI-ProteinID: QDK38988
UniProt: A0A514WZP9
LinkDB
Position
complement(3340294..3341118)
AA seq 274 aa
MNLDLPLSEYTYIAFDTETSGAYPVGFDIVEFGAVKYYKGEEIGRLQFLLKPRETMSDFI
IGIHGITNEMVADAPSIASKIVEIHEFFKGCIVLAHHCPFDLGFLTLEFEKAGLPLPTEP
ALCTSLLSRKLIHGVENHKLQTLVKHLNIDGGQAHRAYDDAKSCLLVAVECFKKLGEEAT
LAAAIKSQGKQLWWKDYSLSGRDPILRTLIDSINTKRDIDMIYDGGSNKGETRRVKPIGI
VRNPDGDYLQAFCLKDQTAKRYYLSRIKDATTVF
NT seq 825 nt   +upstreamnt  +downstreamnt
atgaatttagatctgcctttaagcgaatacacttatatagcctttgataccgaaacaagc
ggagcttacccagtcgggttcgatatcgtcgagttcggcgcggtaaaatactacaagggc
gaagaaatcgggcgcttgcagttcttattaaagccccgtgaaaccatgagcgattttatt
atcggtattcacggcatcaccaacgaaatggtggccgatgcgccaagcatcgcaagcaag
atcgttgaaattcatgagtttttcaaaggctgcatcgtgctggcccatcactgtcccttt
gatttgggtttcctgactcttgaatttgaaaaagcaggtttgcctttaccgactgaaccc
gcactgtgcacaagtcttctttcacgtaaacttattcacggcgtagaaaatcacaagcta
caaactttggtgaagcatttgaacattgatggcggtcaagcacatcgtgcctacgatgat
gcgaagtcatgtctgttggtagctgtcgaatgcttcaaaaaattaggcgaagaagcgact
ttagccgctgcaatcaaaagccaaggcaaacaattgtggtggaaagattattctttatca
ggtcgcgatccaattttgcgcacattgattgattctataaatacaaagcgcgatatagat
atgatctatgatggcggatccaataaaggtgaaactcgccgcgtgaaacctattggtatc
gtgcgaaatcctgacggggattacttgcaagccttctgtcttaaggaccagacggcgaaa
cgctactacttgtcacgtatcaaagacgctacgactgtgttctag

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