Bdellovibrio sp. NC01: DOE51_16035
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Entry
DOE51_16035 CDS
T06360
Name
(GenBank) exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
bdc
Bdellovibrio sp. NC01
Pathway
bdc03030
DNA replication
bdc03430
Mismatch repair
bdc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bdc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
DOE51_16035
03430 Mismatch repair
DOE51_16035
03440 Homologous recombination
DOE51_16035
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bdc03032
]
DOE51_16035
03400 DNA repair and recombination proteins [BR:
bdc03400
]
DOE51_16035
Enzymes [BR:
bdc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
DOE51_16035
DNA replication proteins [BR:
bdc03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
DOE51_16035
DNA repair and recombination proteins [BR:
bdc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
DOE51_16035
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
WYL
Motif
Other DBs
NCBI-ProteinID:
QDK38988
UniProt:
A0A514WZP9
LinkDB
All DBs
Position
complement(3340294..3341118)
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AA seq
274 aa
AA seq
DB search
MNLDLPLSEYTYIAFDTETSGAYPVGFDIVEFGAVKYYKGEEIGRLQFLLKPRETMSDFI
IGIHGITNEMVADAPSIASKIVEIHEFFKGCIVLAHHCPFDLGFLTLEFEKAGLPLPTEP
ALCTSLLSRKLIHGVENHKLQTLVKHLNIDGGQAHRAYDDAKSCLLVAVECFKKLGEEAT
LAAAIKSQGKQLWWKDYSLSGRDPILRTLIDSINTKRDIDMIYDGGSNKGETRRVKPIGI
VRNPDGDYLQAFCLKDQTAKRYYLSRIKDATTVF
NT seq
825 nt
NT seq
+upstream
nt +downstream
nt
atgaatttagatctgcctttaagcgaatacacttatatagcctttgataccgaaacaagc
ggagcttacccagtcgggttcgatatcgtcgagttcggcgcggtaaaatactacaagggc
gaagaaatcgggcgcttgcagttcttattaaagccccgtgaaaccatgagcgattttatt
atcggtattcacggcatcaccaacgaaatggtggccgatgcgccaagcatcgcaagcaag
atcgttgaaattcatgagtttttcaaaggctgcatcgtgctggcccatcactgtcccttt
gatttgggtttcctgactcttgaatttgaaaaagcaggtttgcctttaccgactgaaccc
gcactgtgcacaagtcttctttcacgtaaacttattcacggcgtagaaaatcacaagcta
caaactttggtgaagcatttgaacattgatggcggtcaagcacatcgtgcctacgatgat
gcgaagtcatgtctgttggtagctgtcgaatgcttcaaaaaattaggcgaagaagcgact
ttagccgctgcaatcaaaagccaaggcaaacaattgtggtggaaagattattctttatca
ggtcgcgatccaattttgcgcacattgattgattctataaatacaaagcgcgatatagat
atgatctatgatggcggatccaataaaggtgaaactcgccgcgtgaaacctattggtatc
gtgcgaaatcctgacggggattacttgcaagccttctgtcttaaggaccagacggcgaaa
cgctactacttgtcacgtatcaaagacgctacgactgtgttctag
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