Bradyrhizobium daqingense: LPJ38_07960
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Entry
LPJ38_07960 CDS
T07756
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
bdg
Bradyrhizobium daqingense
Pathway
bdg03030
DNA replication
bdg03410
Base excision repair
bdg03420
Nucleotide excision repair
bdg03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bdg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LPJ38_07960 (polA)
03410 Base excision repair
LPJ38_07960 (polA)
03420 Nucleotide excision repair
LPJ38_07960 (polA)
03440 Homologous recombination
LPJ38_07960 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bdg03032
]
LPJ38_07960 (polA)
03400 DNA repair and recombination proteins [BR:
bdg03400
]
LPJ38_07960 (polA)
Enzymes [BR:
bdg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LPJ38_07960 (polA)
DNA replication proteins [BR:
bdg03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
LPJ38_07960 (polA)
DNA repair and recombination proteins [BR:
bdg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
LPJ38_07960 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
LPJ38_07960 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
UFS90663
LinkDB
All DBs
Position
complement(1704771..1707860)
Genome browser
AA seq
1029 aa
AA seq
DB search
MPKTSPKTTAKADTKAAPKAAADTKSVAKAATTAAAKPVAAKAAGKGDHVFLVDGSSYIF
RAYHALPPLNRKSDGLQVNAVLGFCNMLWKLLRDMPEDNRPTHLAIIFDKSEITFRNKIY
PDYKAHRPPAPDDLIPQFALIREAVRAFDLPCLEQVGFEADDLIATYVRQACERGASATI
VSSDKDLMQLVTDCVTMYDTMKDRRIGIPEVIEKFGVPPEKVVEVQALAGDSTDNVPGVP
GIGIKTAAQLITEYGDLDQLLFRAGEIKQPKRREALLENAEKARISRQLVLLDDKVDLEV
PLDDLAVHEPDARKLVAFLKAMEFTTLTRRVADYAQIDPANVDADPGYASGASVFSPLPP
SDVVPTPGDATPASARPNQPSTSASKEDKAASPKGAPISLAAAREEALRKLPVDRTKYQA
INTLKELDAFIARIHDAGHVAIETRANSIDPMQADLCGIALALAPNEACYVPLAHKQSGG
GAGLFDTGLVPDQVKHADAIEALRPVLESTGILKIGFDVKFTAVMLAQHGITLRNTDDAL
LISYVLDAGRGSHAIESLSERWFGHAMLKESELLGSGKGKITFDQLPIDKAAPLSAEGAD
MALRVWRVLKPRLVAEHMTTVYETLERPLVSVLARMERRGISIDRQVLSRLSGDFAQTAA
RVEAEIQQIAGEPVNVGSPKQIGDILFGKMGLPGGTKTKTGAWSTTAQVLDELAEQGHDF
PKKILEWRQVSKLKSTYTDALPTYVNPQTHRVHTTYALAATTTGRLSSNEPNLQNIPVRT
EDGRKIRRAFIATPGHKLVSADYSQIELRLLAEIADIPVLKQAFRDGLDIHAMTASEMFG
VPIKGMPSEIRRRAKAINFGIIYGISAFGLANQLGIAREEASAYIKKYFERFPGIRAYMD
ETRDFCRSHGYVTTLFGRKMHYPDIKASNASVRAFNERAAINARLQGTAADIIRRAMTRV
EDALAEKKLSAQMLLQVHDELIFEVPDAEVEATLPVVQRVMQDAPFPAVLLSVPLHVDAR
AATNWDEAH
NT seq
3090 nt
NT seq
+upstream
nt +downstream
nt
atgcccaaaacctccccgaagaccaccgccaaagccgacaccaaggccgcgcccaaggca
gccgccgacaccaagtctgttgccaaagccgcgacgacagctgctgccaaaccggttgca
gcgaaggcggccggcaagggcgatcatgtgttcctggtcgacggttcctcctacatcttc
cgcgcctatcacgcgctgccgccgctgaaccgcaagtccgacggcctccaggtcaatgcg
gtgctcggtttctgcaacatgctgtggaagctgctccgcgacatgcccgaggacaaccgt
ccgacgcatctcgccatcatcttcgacaagtcggagatcaccttccgcaacaagatctat
cccgactacaaggcgcaccggccgccggcgcccgatgacctcatcccgcaattcgcgctg
atccgcgaggcggtccgcgccttcgacctgccctgcctggaacaggtgggattcgaggcc
gacgatttgattgcgacctatgtgcggcaggcttgcgagcgtggcgccagcgcgaccatc
gtgtcttccgacaaggatttgatgcagctcgtcaccgactgcgtcacgatgtacgacact
atgaaggaccgccgcatcggcatccccgaggtgatcgagaaattcggcgtgccgccggag
aaggtggtcgaggtgcaggcgctcgcgggcgactccaccgacaacgtacctggcgtaccc
ggcatcggcatcaagaccgcggcgcagctgatcaccgaatatggcgacctcgatcagttg
ctattccgcgccggcgagatcaagcagcccaagcgacgcgaggcgctgctggagaacgcc
gagaaggcgcggatctcgcggcagctcgtgctgctcgacgacaaggtcgacctcgaggtg
ccgctggacgacctcgcggtgcacgagcccgacgcgcgcaagctggtcgccttcctcaag
gcgatggagttcacaacgttgacgcggcgcgtcgccgactatgcgcagatcgatcctgcc
aatgtcgatgccgaccccggctatgccagcggcgccagcgtgttctcgccgctgccgccc
tcggacgtcgtgcccacgccgggcgacgccacgccggcatcagcccggccgaaccagccc
agcacatcggcgagcaaggaggacaaggccgcaagcccgaaaggcgcgccgatctcgctc
gccgccgcgcgcgaagaggccttgcgcaagcttcccgtcgaccgaaccaagtaccaggcg
atcaatacgctgaaggagctcgacgccttcatcgcgcgcatccatgatgccggccatgtc
gcgatcgagacgcgagcgaactcgatcgatccgatgcaggccgatctttgcggcatcgcg
ctggcgctggcgccgaacgaggcctgctatgtgccgctggcgcacaagcagtctggcggc
ggcgccggcctgttcgatacgggcctcgtgcccgatcaggtcaagcatgcggatgcgatc
gaagcgctgcggccggtgctggaatcgacaggcattctcaagatcggcttcgacgtcaag
ttcaccgccgtgatgctggcgcagcacggcatcaccctgcgcaacaccgatgatgcgttg
ctgatctcctacgtgctcgatgcgggccgcggctcccacgcgatcgaatcgctgtccgag
cgctggttcggccatgccatgctgaaggagagcgagctgctcggcagcggcaaaggcaag
atcaccttcgaccagctgccgatcgacaaggccgcgccgctgtcggcggaaggcgccgac
atggccttgcgcgtctggcgcgtgctgaagccgcgcctcgtcgccgagcacatgaccacg
gtgtacgagacgctggagcggccgctggtgtcggtgcttgcccgcatggagcggcgcggc
atctcgatcgaccgccaggtgctgtcgcgcctctccggcgatttcgcccagaccgcagcg
cgcgtcgaggccgagatccagcagattgccggcgagccggtcaatgtcggcagccccaag
cagatcggcgacatcctgttcggcaagatgggactgccgggcggcaccaagacgaagacg
ggcgcatggtcgaccaccgcccaggtgctcgatgagctcgccgagcagggccacgacttc
ccgaagaagatcttggagtggcgccaggtctcgaagctgaaatcgacctacaccgacgcg
ctgccgacctacgtcaatccgcagacccatcgcgtccacacgacttacgcgctggccgcg
accactacggggcggctgtcgtcgaacgagccgaacttgcagaacatcccggtgcgcacc
gaggacggccgcaagatccgccgcgccttcatcgcgacgccgggacacaagctggtgtcg
gccgactattctcagatcgagctgcggctgctcgcggagatcgcggacatccccgtgctg
aagcaggcgttccgcgacgggctcgacattcacgccatgacggcgtcggaaatgttcggc
gtgccgatcaagggcatgccgagcgagatccgccgccgcgccaaggcgatcaatttcggc
atcatctacggcatctccgcgtttggcctcgccaaccagctcggcatcgcgcgcgaggag
gcctcggcgtacatcaagaaatatttcgagcgcttccccggcatccgcgcctatatggac
gagacgcgcgatttctgccgcagccacggctacgtcaccacgctgttcggccggaagatg
cactaccccgacatcaaggcctccaacgcctcggtgcgcgccttcaacgagcgcgctgcg
atcaacgcccggctccagggcaccgccgccgacatcatccgccgtgccatgacgcgcgtc
gaggacgcactcgccgagaagaagctgtcggcgcagatgctgctgcaagtgcatgacgaa
ttgatcttcgaggtgccggacgccgaggtcgaggcgacgctgcccgtcgtgcaacgcgtc
atgcaggacgcgccattccccgccgtgctgctgtcggtgccgctgcatgtcgacgcgcgc
gcggcgacgaactgggacgaggcgcattag
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