KEGG   Bradyrhizobium daqingense: LPJ38_07960
Entry
LPJ38_07960       CDS       T07756                                 
Symbol
polA
Name
(GenBank) DNA polymerase I
  KO
K02335  DNA polymerase I [EC:2.7.7.7]
Organism
bdg  Bradyrhizobium daqingense
Pathway
bdg03030  DNA replication
bdg03410  Base excision repair
bdg03420  Nucleotide excision repair
bdg03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:bdg00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    LPJ38_07960 (polA)
   03410 Base excision repair
    LPJ38_07960 (polA)
   03420 Nucleotide excision repair
    LPJ38_07960 (polA)
   03440 Homologous recombination
    LPJ38_07960 (polA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:bdg03032]
    LPJ38_07960 (polA)
   03400 DNA repair and recombination proteins [BR:bdg03400]
    LPJ38_07960 (polA)
Enzymes [BR:bdg01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     LPJ38_07960 (polA)
DNA replication proteins [BR:bdg03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     LPJ38_07960 (polA)
DNA repair and recombination proteins [BR:bdg03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA polymerase I
     LPJ38_07960 (polA)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     LPJ38_07960 (polA)
SSDB
Motif
Pfam: DNA_pol_A 5_3_exonuc_N 5_3_exonuc DNA_pol_A_exo1
Other DBs
NCBI-ProteinID: UFS90663
LinkDB
Position
complement(1704771..1707860)
AA seq 1029 aa
MPKTSPKTTAKADTKAAPKAAADTKSVAKAATTAAAKPVAAKAAGKGDHVFLVDGSSYIF
RAYHALPPLNRKSDGLQVNAVLGFCNMLWKLLRDMPEDNRPTHLAIIFDKSEITFRNKIY
PDYKAHRPPAPDDLIPQFALIREAVRAFDLPCLEQVGFEADDLIATYVRQACERGASATI
VSSDKDLMQLVTDCVTMYDTMKDRRIGIPEVIEKFGVPPEKVVEVQALAGDSTDNVPGVP
GIGIKTAAQLITEYGDLDQLLFRAGEIKQPKRREALLENAEKARISRQLVLLDDKVDLEV
PLDDLAVHEPDARKLVAFLKAMEFTTLTRRVADYAQIDPANVDADPGYASGASVFSPLPP
SDVVPTPGDATPASARPNQPSTSASKEDKAASPKGAPISLAAAREEALRKLPVDRTKYQA
INTLKELDAFIARIHDAGHVAIETRANSIDPMQADLCGIALALAPNEACYVPLAHKQSGG
GAGLFDTGLVPDQVKHADAIEALRPVLESTGILKIGFDVKFTAVMLAQHGITLRNTDDAL
LISYVLDAGRGSHAIESLSERWFGHAMLKESELLGSGKGKITFDQLPIDKAAPLSAEGAD
MALRVWRVLKPRLVAEHMTTVYETLERPLVSVLARMERRGISIDRQVLSRLSGDFAQTAA
RVEAEIQQIAGEPVNVGSPKQIGDILFGKMGLPGGTKTKTGAWSTTAQVLDELAEQGHDF
PKKILEWRQVSKLKSTYTDALPTYVNPQTHRVHTTYALAATTTGRLSSNEPNLQNIPVRT
EDGRKIRRAFIATPGHKLVSADYSQIELRLLAEIADIPVLKQAFRDGLDIHAMTASEMFG
VPIKGMPSEIRRRAKAINFGIIYGISAFGLANQLGIAREEASAYIKKYFERFPGIRAYMD
ETRDFCRSHGYVTTLFGRKMHYPDIKASNASVRAFNERAAINARLQGTAADIIRRAMTRV
EDALAEKKLSAQMLLQVHDELIFEVPDAEVEATLPVVQRVMQDAPFPAVLLSVPLHVDAR
AATNWDEAH
NT seq 3090 nt   +upstreamnt  +downstreamnt
atgcccaaaacctccccgaagaccaccgccaaagccgacaccaaggccgcgcccaaggca
gccgccgacaccaagtctgttgccaaagccgcgacgacagctgctgccaaaccggttgca
gcgaaggcggccggcaagggcgatcatgtgttcctggtcgacggttcctcctacatcttc
cgcgcctatcacgcgctgccgccgctgaaccgcaagtccgacggcctccaggtcaatgcg
gtgctcggtttctgcaacatgctgtggaagctgctccgcgacatgcccgaggacaaccgt
ccgacgcatctcgccatcatcttcgacaagtcggagatcaccttccgcaacaagatctat
cccgactacaaggcgcaccggccgccggcgcccgatgacctcatcccgcaattcgcgctg
atccgcgaggcggtccgcgccttcgacctgccctgcctggaacaggtgggattcgaggcc
gacgatttgattgcgacctatgtgcggcaggcttgcgagcgtggcgccagcgcgaccatc
gtgtcttccgacaaggatttgatgcagctcgtcaccgactgcgtcacgatgtacgacact
atgaaggaccgccgcatcggcatccccgaggtgatcgagaaattcggcgtgccgccggag
aaggtggtcgaggtgcaggcgctcgcgggcgactccaccgacaacgtacctggcgtaccc
ggcatcggcatcaagaccgcggcgcagctgatcaccgaatatggcgacctcgatcagttg
ctattccgcgccggcgagatcaagcagcccaagcgacgcgaggcgctgctggagaacgcc
gagaaggcgcggatctcgcggcagctcgtgctgctcgacgacaaggtcgacctcgaggtg
ccgctggacgacctcgcggtgcacgagcccgacgcgcgcaagctggtcgccttcctcaag
gcgatggagttcacaacgttgacgcggcgcgtcgccgactatgcgcagatcgatcctgcc
aatgtcgatgccgaccccggctatgccagcggcgccagcgtgttctcgccgctgccgccc
tcggacgtcgtgcccacgccgggcgacgccacgccggcatcagcccggccgaaccagccc
agcacatcggcgagcaaggaggacaaggccgcaagcccgaaaggcgcgccgatctcgctc
gccgccgcgcgcgaagaggccttgcgcaagcttcccgtcgaccgaaccaagtaccaggcg
atcaatacgctgaaggagctcgacgccttcatcgcgcgcatccatgatgccggccatgtc
gcgatcgagacgcgagcgaactcgatcgatccgatgcaggccgatctttgcggcatcgcg
ctggcgctggcgccgaacgaggcctgctatgtgccgctggcgcacaagcagtctggcggc
ggcgccggcctgttcgatacgggcctcgtgcccgatcaggtcaagcatgcggatgcgatc
gaagcgctgcggccggtgctggaatcgacaggcattctcaagatcggcttcgacgtcaag
ttcaccgccgtgatgctggcgcagcacggcatcaccctgcgcaacaccgatgatgcgttg
ctgatctcctacgtgctcgatgcgggccgcggctcccacgcgatcgaatcgctgtccgag
cgctggttcggccatgccatgctgaaggagagcgagctgctcggcagcggcaaaggcaag
atcaccttcgaccagctgccgatcgacaaggccgcgccgctgtcggcggaaggcgccgac
atggccttgcgcgtctggcgcgtgctgaagccgcgcctcgtcgccgagcacatgaccacg
gtgtacgagacgctggagcggccgctggtgtcggtgcttgcccgcatggagcggcgcggc
atctcgatcgaccgccaggtgctgtcgcgcctctccggcgatttcgcccagaccgcagcg
cgcgtcgaggccgagatccagcagattgccggcgagccggtcaatgtcggcagccccaag
cagatcggcgacatcctgttcggcaagatgggactgccgggcggcaccaagacgaagacg
ggcgcatggtcgaccaccgcccaggtgctcgatgagctcgccgagcagggccacgacttc
ccgaagaagatcttggagtggcgccaggtctcgaagctgaaatcgacctacaccgacgcg
ctgccgacctacgtcaatccgcagacccatcgcgtccacacgacttacgcgctggccgcg
accactacggggcggctgtcgtcgaacgagccgaacttgcagaacatcccggtgcgcacc
gaggacggccgcaagatccgccgcgccttcatcgcgacgccgggacacaagctggtgtcg
gccgactattctcagatcgagctgcggctgctcgcggagatcgcggacatccccgtgctg
aagcaggcgttccgcgacgggctcgacattcacgccatgacggcgtcggaaatgttcggc
gtgccgatcaagggcatgccgagcgagatccgccgccgcgccaaggcgatcaatttcggc
atcatctacggcatctccgcgtttggcctcgccaaccagctcggcatcgcgcgcgaggag
gcctcggcgtacatcaagaaatatttcgagcgcttccccggcatccgcgcctatatggac
gagacgcgcgatttctgccgcagccacggctacgtcaccacgctgttcggccggaagatg
cactaccccgacatcaaggcctccaacgcctcggtgcgcgccttcaacgagcgcgctgcg
atcaacgcccggctccagggcaccgccgccgacatcatccgccgtgccatgacgcgcgtc
gaggacgcactcgccgagaagaagctgtcggcgcagatgctgctgcaagtgcatgacgaa
ttgatcttcgaggtgccggacgccgaggtcgaggcgacgctgcccgtcgtgcaacgcgtc
atgcaggacgcgccattccccgccgtgctgctgtcggtgccgctgcatgtcgacgcgcgc
gcggcgacgaactgggacgaggcgcattag

DBGET integrated database retrieval system